Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 U8.4-201ENST00000363626 134 ntBASIC5.07□□□□□ -1.6
LDB2O43679 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
LDB2O43679 RNU6-207P-201ENST00000384137 107 ntBASIC5.07□□□□□ -1.6
LDB2O43679 RNU6-481P-201ENST00000384194 107 ntBASIC5.07□□□□□ -1.6
LDB2O43679 RNU6-31P-201ENST00000384388 108 ntBASIC5.07□□□□□ -1.6
LDB2O43679 RNU6-298P-201ENST00000390888 96 ntBASIC5.07□□□□□ -1.6
LDB2O43679 HMGB1P10-201ENST00000395823 563 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AC013442.1-201ENST00000397347 228 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AF228730.1-201ENST00000397972 663 ntBASIC5.07□□□□□ -1.6
LDB2O43679 ZNF602P-201ENST00000405929 924 ntBASIC5.07□□□□□ -1.6
LDB2O43679 SNORA77-201ENST00000408716 125 ntBASIC5.07□□□□□ -1.6
LDB2O43679 RNU2-17P-201ENST00000410290 190 ntBASIC5.07□□□□□ -1.6
LDB2O43679 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 FABP5P3-201ENST00000437960 408 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AL450023.3-201ENST00000440592 271 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AL353898.1-201ENST00000444055 238 ntBASIC5.07□□□□□ -1.6
LDB2O43679 CEACAMP7-201ENST00000444105 496 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 MTND1P33-201ENST00000446251 917 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.07□□□□□ -1.6
LDB2O43679 RN7SL826P-201ENST00000479724 288 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AC105233.1-201ENST00000498840 781 ntBASIC5.07□□□□□ -1.6
LDB2O43679 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.07□□□□□ -1.6
LDB2O43679 AC093720.1-201ENST00000505681 714 ntBASIC5.07□□□□□ -1.6
LDB2O43679 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.07□□□□□ -1.6
LDB2O43679 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.07□□□□□ -1.6
LDB2O43679 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.07□□□□□ -1.6
LDB2O43679 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 EEF1A1P37-201ENST00000522748 715 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AP000916.1-201ENST00000533869 835 ntBASIC5.07□□□□□ -1.6
LDB2O43679 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.07□□□□□ -1.6
LDB2O43679 AC011447.4-201ENST00000587562 111 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.07□□□□□ -1.6
LDB2O43679 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 AC010487.1-201ENST00000594408 1172 ntBASIC5.07□□□□□ -1.6
LDB2O43679 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 AP000648.2-201ENST00000624182 404 ntBASIC5.07□□□□□ -1.6
LDB2O43679 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LDB2O43679 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 AC010266.2-201ENST00000564741 3255 ntBASIC5.07□□□□□ -1.6
LDB2O43679 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
LDB2O43679 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LDB2O43679 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LDB2O43679 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDB2O43679 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 AC073429.2-201ENST00000569694 1444 ntBASIC5.06□□□□□ -1.6
LDB2O43679 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.06□□□□□ -1.6
LDB2O43679 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.06□□□□□ -1.6
LDB2O43679 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.06□□□□□ -1.6
LDB2O43679 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 SNURFL-201ENST00000309296 343 ntBASIC5.06□□□□□ -1.6
LDB2O43679 RNU5B-4P-201ENST00000363508 111 ntBASIC5.06□□□□□ -1.6
LDB2O43679 MIR765-201ENST00000390226 114 ntBASIC5.06□□□□□ -1.6
LDB2O43679 ATP5HP3-201ENST00000396994 486 ntBASIC5.06□□□□□ -1.6
LDB2O43679 RNU2-22P-201ENST00000411266 212 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.06□□□□□ -1.6
LDB2O43679 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.06□□□□□ -1.6
LDB2O43679 DDX39BP1-205ENST00000422507 192 ntBASIC5.06□□□□□ -1.6
LDB2O43679 MGAT2P2-201ENST00000427194 797 ntBASIC5.06□□□□□ -1.6
LDB2O43679 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.06□□□□□ -1.6
LDB2O43679 ELOCP11-201ENST00000436690 332 ntBASIC5.06□□□□□ -1.6
LDB2O43679 RPS29P9-201ENST00000440360 171 ntBASIC5.06□□□□□ -1.6
LDB2O43679 TXNP5-201ENST00000441043 315 ntBASIC5.06□□□□□ -1.6
LDB2O43679 RPL34P20-201ENST00000442771 351 ntBASIC5.06□□□□□ -1.6
LDB2O43679 ELOCP13-201ENST00000443934 329 ntBASIC5.06□□□□□ -1.6
LDB2O43679 RPS27P5-201ENST00000444247 244 ntBASIC5.06□□□□□ -1.6
LDB2O43679 ELOCP16-201ENST00000444494 332 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.06□□□□□ -1.6
LDB2O43679 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 SBDSP1-204ENST00000453858 737 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 RN7SL329P-201ENST00000467740 299 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms