Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-1297P-201ENST00000384415 104 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 RNU1-149P-201ENST00000390870 161 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AL353133.1-201ENST00000407695 401 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 RNU6-1148P-201ENST00000410992 104 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 SLC35E1P1-201ENST00000419313 864 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AC006509.1-201ENST00000420788 634 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AHCYP8-201ENST00000425108 209 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.62□□□□□ -1.19
HOXA2O43364 SRIP2-201ENST00000428470 166 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 NPM1P18-201ENST00000434232 732 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 RPS3AP54-201ENST00000435535 734 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.62□□□□□ -1.19
HOXA2O43364 RPS18P1-201ENST00000447840 458 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 SBDSP1-204ENST00000453858 737 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 PPP1R2P5-201ENST00000457256 603 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 RNU6-329P-201ENST00000459618 107 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AC066616.1-201ENST00000486795 413 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 SCARNA6.1-201ENST00000516989 238 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 RNU6-201P-201ENST00000517100 61 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.62□□□□□ -1.19
HOXA2O43364 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.62□□□□□ -1.19
HOXA2O43364 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 AL162632.2-201ENST00000553933 399 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 RPL26P30-202ENST00000602923 645 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 CR382285.1-202ENST00000604687 547 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AL080274.1-201ENST00000605565 220 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 AL080312.2-201ENST00000613001 630 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 MIR6849-201ENST00000618543 69 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 OR4G1P-203ENST00000641984 1631 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 R3HDM2P1-201ENST00000505381 1960 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXA2O43364 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
HOXA2O43364 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
HOXA2O43364 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.62□□□□□ -1.19
HOXA2O43364 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
HOXA2O43364 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXA2O43364 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
HOXA2O43364 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXA2O43364 LARP1BP1-201ENST00000506036 1359 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
HOXA2O43364 AC107980.1-201ENST00000558671 3355 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXA2O43364 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXA2O43364 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXA2O43364 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXA2O43364 AC011155.1-201ENST00000316512 456 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 RN7SKP6-201ENST00000364795 319 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXA2O43364 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXA2O43364 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXA2O43364 AC026310.1-201ENST00000396004 378 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXA2O43364 AL590290.1-201ENST00000405336 380 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 NDUFB4P5-201ENST00000415445 361 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXA2O43364 AC007394.1-201ENST00000421941 531 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 SPATA20P1-201ENST00000423089 438 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXA2O43364 ARL2BPP10-201ENST00000446487 531 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXA2O43364 AC108693.1-201ENST00000496068 432 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 RN7SL143P-201ENST00000496780 297 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXA2O43364 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXA2O43364 Y_RNA.720-201ENST00000517166 92 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 IGLVV-66-201ENST00000523818 341 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 PSMA2P1-201ENST00000526365 646 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.61□□□□□ -1.19
HOXA2O43364 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXA2O43364 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.61□□□□□ -1.19
HOXA2O43364 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXA2O43364 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXA2O43364 FRG2DP-202ENST00000566967 323 ntBASIC7.61□□□□□ -1.19
HOXA2O43364 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms