Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 RNU6-1120P-201ENST00000362988 108 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 RN7SKP62-201ENST00000384539 329 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 MIR199B-201ENST00000384849 110 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AL354719.1-201ENST00000406535 843 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 ELOCP4-201ENST00000420090 333 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 RSU1P2-202ENST00000437884 485 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AL034399.1-201ENST00000451535 380 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 PRPF38AP1-201ENST00000451976 933 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC090142.1-201ENST00000465776 462 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC011352.2-201ENST00000514574 1016 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 RNU6-835P-201ENST00000516974 104 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AL389895.1-201ENST00000554127 252 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 HSPE1P3-201ENST00000559254 309 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC023827.2-201ENST00000566880 1061 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 PRR13P3-201ENST00000603578 376 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC009027.1-201ENST00000604510 479 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC104184.1-201ENST00000607513 721 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 MIR6807-201ENST00000621968 92 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC100810.6-201ENST00000638068 285 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AL121768.1-201ENST00000613917 2544 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AC132219.2-201ENST00000624416 2327 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 LCOR-201ENST00000286067 4542 ntBASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 AC022031.1-201ENST00000585985 2593 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 RN7SKP107-201ENST00000364157 290 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 RNU1-24P-201ENST00000364285 165 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 SNORA69-201ENST00000383895 132 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 Y_RNA.394-201ENST00000383942 103 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 RPL7P25-201ENST00000404151 721 ntBASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDHGA11Q9Y5H2 RPS26P40-201ENST00000435209 294 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms