Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SNORD65.1-201ENST00000390889 71 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 U3.25-201ENST00000391209 220 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU4-72P-201ENST00000410754 173 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU2-6P-201ENST00000411404 190 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC093155.2-201ENST00000420734 937 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC234781.2-201ENST00000426370 994 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC007559.1-201ENST00000428736 355 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC073410.1-201ENST00000435125 589 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 ACTR3P2-201ENST00000439585 1257 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 CUBNP2-201ENST00000443534 1139 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL23AP60-201ENST00000450011 454 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 RFC5P1-201ENST00000454419 874 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 OSTCP1-201ENST00000455507 450 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC015724.1-201ENST00000478577 156 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 CDC42P3-201ENST00000518493 633 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC136777.2-201ENST00000522979 358 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC008015.1-201ENST00000555505 465 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC007225.2-201ENST00000562529 256 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC010547.6-201ENST00000571789 193 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 RN7SL787P-201ENST00000613000 284 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AL049767.1-202ENST00000637826 242 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC024587.1-201ENST00000505925 2157 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC138907.8-201ENST00000623981 2256 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AL353743.4-201ENST00000422653 1547 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU6-839P-201ENST00000363347 108 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RN7SKP128-201ENST00000364270 303 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 NRBF2P2-201ENST00000413087 861 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC009518.2-201ENST00000418056 731 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL34P3-201ENST00000421454 338 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 BX323845.3-201ENST00000428215 527 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 UBE2V1P1-201ENST00000430836 445 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 ATP5F1P1-201ENST00000433775 569 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 MTND3P1-201ENST00000441336 220 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL23AP76-201ENST00000441860 458 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AP000281.1-201ENST00000444036 316 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL36AP39-201ENST00000445859 318 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 SNRPCP3-201ENST00000474888 476 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 GAPDHP36-201ENST00000480688 918 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC126121.1-201ENST00000482313 553 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms