Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC009643.2-201ENST00000603543 1448 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 SNORA27.3-201ENST00000364937 134 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 TBCAP2-201ENST00000416175 326 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 CACYBPP1-201ENST00000438592 684 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 NPM1P33-201ENST00000438918 872 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 MTCYBP12-201ENST00000440559 1134 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AL353898.1-201ENST00000444055 238 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC000111.2-201ENST00000448200 210 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 HIGD1AP8-201ENST00000453927 274 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AP000942.1-201ENST00000463969 747 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC087272.1-201ENST00000523624 533 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC087783.2-201ENST00000605070 562 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC023813.4-201ENST00000607580 580 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AL162233.1-201ENST00000620014 944 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC112694.2-201ENST00000623697 768 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 AC099654.2-201ENST00000433031 1980 ntBASIC4.64□□□□□ -1.67
ATG4BQ9Y4P1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AP001642.1-201ENST00000624727 2117 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC008758.3-201ENST00000507003 1829 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 RNU4-39P-201ENST00000362455 127 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 SNORA51.8-201ENST00000384234 132 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 RNU6-225P-201ENST00000384613 103 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 RNA5SP345-201ENST00000410646 108 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 GTF2IP5-201ENST00000414608 731 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 CHEK2P3-201ENST00000416118 248 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC092162.1-201ENST00000432828 434 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 RPL23AP56-201ENST00000460778 453 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 GYG1P1-201ENST00000460864 698 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC116562.1-201ENST00000485355 781 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 RN7SL346P-201ENST00000491561 294 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 ENPP7P9-201ENST00000514456 627 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 RNU6-889P-201ENST00000517189 103 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC011487.3-201ENST00000593607 453 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AP001521.2-201ENST00000608772 546 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 Mico1.1-201ENST00000611698 204 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AL049539.1-201ENST00000611964 459 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AL022401.1-201ENST00000619498 108 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AL445528.2-201ENST00000620582 470 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC145207.9-201ENST00000623802 325 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AL731532.2-201ENST00000623542 1953 ntBASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms