Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR1302-9-201ENST00000408365 138 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 MIR1302-10-201ENST00000408734 138 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AL157884.1-201ENST00000424561 454 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC130360.1-201ENST00000425489 1117 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 OR6K1P-201ENST00000456766 971 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC130365.2-201ENST00000525882 1201 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 MIR4433B-201ENST00000581329 102 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC091488.1-201ENST00000604239 660 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AL162730.1-201ENST00000605734 292 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 MIR1302-2-201ENST00000607096 138 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC135507.2-201ENST00000612443 309 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 MIR6085-201ENST00000618314 110 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC090574.1-201ENST00000623186 233 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AP003122.6-201ENST00000623831 495 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
ZC3H4Q9UPT8 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC140479.2-201ENST00000421567 3130 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 RNU4-55P-201ENST00000410731 137 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC068533.2-201ENST00000411872 306 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL356583.2-201ENST00000426536 280 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 USP9YP9-201ENST00000429406 715 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC092757.1-201ENST00000467293 467 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC021678.1-201ENST00000505195 936 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 SNX5P1-201ENST00000505757 1041 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 MTCO3P9-201ENST00000506989 781 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 IGKV2-18-201ENST00000522607 343 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 RPA2P1-201ENST00000556557 721 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 SNORD95-201ENST00000579879 68 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC090236.2-201ENST00000587933 1101 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 LLPHP1-201ENST00000603571 367 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC104581.5-201ENST00000624171 7141 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AL031985.3-201ENST00000565390 2449 ntBASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms