Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC245517.2-201ENST00000442890 346 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 RPS17P2-201ENST00000461663 408 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 RPL7AP28-201ENST00000464513 571 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC010683.1-201ENST00000473673 378 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 SNORD46.2-201ENST00000516021 102 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 RNU6-551P-201ENST00000516661 103 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 HIGD1AP18-201ENST00000520730 278 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 CYCSP28-201ENST00000534284 321 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC069307.1-201ENST00000602820 447 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 RPL26P30-202ENST00000602923 645 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 SUGT1P3-202ENST00000604259 383 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC015804.1-201ENST00000622935 435 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC005086.4-201ENST00000623065 213 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC079298.2-201ENST00000623885 459 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 OR5AC4P-202ENST00000642086 985 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 Z73965.1-201ENST00000623412 2297 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 IRF5P1-201ENST00000504852 2164 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC017002.4-201ENST00000604721 1525 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 AC120338.1-201ENST00000625074 1541 ntBASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SND1-IT1Q9HBX3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 HSPA8P18-201ENST00000439846 1928 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 EOGT-210ENST00000615922 1931 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 RNU1-20P-201ENST00000363314 162 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL080315.1-201ENST00000406055 466 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 RN7SKP114-201ENST00000410327 279 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL445487.1-201ENST00000415694 1580 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 RFESDP1-201ENST00000422350 461 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 HMGB3P21-201ENST00000452483 547 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AP002345.1-201ENST00000456493 928 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC007998.1-201ENST00000474156 672 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 RN7SL817P-201ENST00000480777 288 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC015864.1-201ENST00000496512 544 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC010350.1-201ENST00000504908 231 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC108157.1-201ENST00000510511 539 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 HMGB1P47-201ENST00000511281 589 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC093770.1-201ENST00000511559 571 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC027544.3-201ENST00000535082 757 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC134349.2-201ENST00000535136 910 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC126177.5-201ENST00000549599 178 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL049870.4-201ENST00000555741 486 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 MIR4271-201ENST00000582451 67 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC017076.1-201ENST00000607613 578 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AL049794.2-201ENST00000616301 365 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 AC019206.1-201ENST00000621938 425 ntBASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms