Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP4-3Q9BYR4 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC2.44□□□□□ -2.02
KRTAP4-3Q9BYR4 AP005901.5-201ENST00000545779 1796 ntBASIC2.44□□□□□ -2.02
KRTAP4-3Q9BYR4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MAPK10-279ENST00000641157 2449 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC068860.1-201ENST00000623701 3736 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC127070.3-201ENST00000503695 3263 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL096816.1-201ENST00000623300 2920 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-834P-201ENST00000362367 110 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 Y_RNA.152-201ENST00000363578 100 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 Y_RNA.192-201ENST00000363977 102 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RN7SKP107-201ENST00000364157 290 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-1317P-201ENST00000364582 104 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 Y_RNA.376-201ENST00000365638 108 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-1103P-201ENST00000384150 107 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RNA5SP176-201ENST00000390956 110 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 Y_RNA.586-201ENST00000391146 98 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MRPL35P1-201ENST00000404272 572 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL136131.1-201ENST00000406079 803 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RN7SKP188-201ENST00000410789 317 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-370P-201ENST00000411008 104 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RN7SKP268-201ENST00000411107 316 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC069213.2-201ENST00000420238 366 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL139421.1-201ENST00000423010 169 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 MTND3P9-201ENST00000429526 346 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL604028.2-201ENST00000437848 788 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 RPL12P49-201ENST00000441100 121 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 BNIP3P2-201ENST00000441221 577 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC092601.1-201ENST00000444526 383 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 HMGN1P36-201ENST00000446623 298 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC007327.1-201ENST00000447461 264 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 AC008280.2-201ENST00000455473 307 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 CST12P-201ENST00000457644 362 ntBASIC2.43□□□□□ -2.02
KRTAP4-3Q9BYR4 VN1R6P-201ENST00000458417 907 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms