Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 SNORD116-1-201ENST00000384335 95 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RNU6-724P-201ENST00000390958 105 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 MTCO3P31-201ENST00000405526 789 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RNU2-42P-201ENST00000410697 113 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC113618.1-201ENST00000416747 285 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RCC2P2-201ENST00000422174 918 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 EIF4EP2-201ENST00000422816 654 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 ZNF886P-201ENST00000450781 723 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 PCMTD1P1-201ENST00000455560 355 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 snoU13.20-201ENST00000459180 104 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RPL7P49-201ENST00000471402 708 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RN7SL326P-201ENST00000477493 296 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC022080.3-201ENST00000544433 482 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC095057.3-201ENST00000567102 1157 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 MIR3663-201ENST00000583207 97 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC090616.1-201ENST00000583895 447 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 U2.14-201ENST00000615943 113 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AL359880.1-201ENST00000621879 266 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 OR8V1P-201ENST00000395193 873 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RNU2-50P-201ENST00000410494 143 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 JKAMPP1-201ENST00000413804 919 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 MTCYBP11-201ENST00000447254 1109 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 USP9YP12-201ENST00000450481 570 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RNU6-1037P-201ENST00000459571 107 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC025674.1-201ENST00000507074 324 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RN7SKP253-201ENST00000516424 309 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC084033.1-201ENST00000550830 633 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC234778.2-201ENST00000566241 354 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC008739.3-201ENST00000603262 127 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 DUXAP3-201ENST00000603616 594 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AP004372.1-201ENST00000604842 844 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 MLECP1-201ENST00000615893 709 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC078883.4-201ENST00000623218 367 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 AC099654.11-201ENST00000638857 294 ntBASIC1.82□□□□□ -2.12
HMCN1Q96RW7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 LARS-212ENST00000510191 3737 ntTSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.82□□□□□ -2.12
HMCN1Q96RW7 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms