Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC067773.1-201ENST00000603284 1094 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC108738.1-201ENST00000603703 237 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 DPRXP5-201ENST00000604662 539 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AP005431.1-201ENST00000618479 319 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 OR8B1P-202ENST00000641132 1178 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC053481.2-202ENST00000582394 1500 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
ERCC4Q92889 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC4Q92889 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC008549.2-201ENST00000333482 706 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC4Q92889 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 PPIAP9-201ENST00000403866 498 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 RPF2P1-201ENST00000424137 906 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 C1DP1-201ENST00000426049 402 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC079807.1-201ENST00000429993 481 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC090018.1-201ENST00000434369 367 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AL445567.1-201ENST00000439121 144 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 CASP3P1-201ENST00000446037 609 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC068135.1-201ENST00000446164 246 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC083899.1-201ENST00000454465 3819 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC107015.1-201ENST00000466902 747 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC094085.1-201ENST00000468914 584 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC023050.1-201ENST00000498198 304 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC093890.1-201ENST00000502554 540 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.23□□□□□ -1.41
ERCC4Q92889 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 RNA5SP230-201ENST00000517039 122 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 HMGB1P1-201ENST00000522557 636 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.23□□□□□ -1.41
ERCC4Q92889 MRPS16P1-201ENST00000523462 412 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 TRIM77BP-201ENST00000524985 1119 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC4Q92889 OR8G3P-201ENST00000533406 921 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AP005403.1-201ENST00000579720 229 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 MIR4311-201ENST00000580794 100 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AL365181.4-201ENST00000609800 547 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AL445423.1-201ENST00000609941 536 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AP000255.1-201ENST00000610276 676 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 AC129778.1-202ENST00000623812 261 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 AL591379.1-207ENST00000635982 261 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 YES1P1-201ENST00000418510 1628 ntBASIC6.23□□□□□ -1.41
ERCC4Q92889 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC4Q92889 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC4Q92889 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ERCC4Q92889 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms