Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC006133.1-201ENST00000617106 264 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNED1Q8TER0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNED1Q8TER0 DHX9P1-201ENST00000436565 3076 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNED1Q8TER0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNED1Q8TER0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC008549.2-201ENST00000333482 706 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC240504.1-201ENST00000395709 845 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AL161909.1-201ENST00000397390 712 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 NACAP7-201ENST00000407371 609 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNED1Q8TER0 COX6CP15-201ENST00000426313 211 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 RPL23AP43-201ENST00000446445 471 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 RHEBP2-201ENST00000450289 600 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 RN7SL542P-201ENST00000467147 294 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNED1Q8TER0 RNU6-1334P-201ENST00000516032 105 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 SNORA31.9-201ENST00000516429 84 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 OR8R1P-201ENST00000543943 764 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC007066.2-202ENST00000566531 914 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC090286.3-201ENST00000573133 187 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 RN7SL703P-201ENST00000578485 302 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 AC099676.1-201ENST00000608886 657 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 AL118556.2-201ENST00000614375 824 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.56□□□□□ -1.52
SNED1Q8TER0 SYT14P1-202ENST00000600441 1448 ntBASIC5.56□□□□□ -1.52
SNED1Q8TER0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 SPRR2C-201ENST00000290702 219 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 MIR383-201ENST00000362257 73 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 RNU1-94P-201ENST00000362627 173 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 NRBF2P2-201ENST00000413087 861 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 AL356095.1-201ENST00000417217 199 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 CKS1BP6-201ENST00000424932 240 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 TPTE2P1-204ENST00000435256 593 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 RRM2P4-201ENST00000441721 562 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 AP002812.1-201ENST00000495378 474 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC053481.3-201ENST00000577881 843 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC092953.2-201ENST00000608000 699 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 AP003497.2-201ENST00000624220 967 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 AC012078.1-201ENST00000405035 1646 ntBASIC5.55□□□□□ -1.52
SNED1Q8TER0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNED1Q8TER0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNED1Q8TER0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 AL034370.1-201ENST00000397254 1590 ntBASIC5.54□□□□□ -1.52
SNED1Q8TER0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNED1Q8TER0 OR51H2P-202ENST00000641424 3046 ntBASIC5.54□□□□□ -1.52
SNED1Q8TER0 CYP1D1P-201ENST00000416662 1433 ntBASIC5.54□□□□□ -1.52
SNED1Q8TER0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNED1Q8TER0 NFYAP1-201ENST00000431953 972 ntBASIC5.54□□□□□ -1.52
SNED1Q8TER0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms