Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 AL669831.4-202ENST00000590817 238 ntBASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 AC009597.2-201ENST00000604659 592 ntBASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 AL513218.1-201ENST00000606527 391 ntBASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 AC097468.3-201ENST00000607956 456 ntBASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 AC104237.2-201ENST00000612456 443 ntBASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 ANKRD62P1-201ENST00000434304 1623 ntBASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
LYSMD3Q7Z3D4 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC020978.6-201ENST00000571197 3177 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC006378.2-201ENST00000623178 2476 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SUGT1P1-201ENST00000379514 476 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RNU1-39P-201ENST00000383897 165 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RNU6-510P-201ENST00000391239 108 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RPL9P21-201ENST00000392269 505 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AL359715.1-201ENST00000404330 555 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RN7SKP268-201ENST00000411107 316 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SNRPFP1-201ENST00000414761 252 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AL589872.1-201ENST00000426602 288 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RPS27AP6-201ENST00000427962 448 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 NANOGP6-201ENST00000429190 847 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC018804.1-201ENST00000430381 618 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RPS10P14-201ENST00000440748 502 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 HSPE1P28-201ENST00000443139 211 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AL356133.1-201ENST00000444762 372 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RPL26P28-201ENST00000451325 435 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SUMO1P2-201ENST00000452524 304 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RPL17P2-201ENST00000491913 451 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RN7SKP11-201ENST00000517018 287 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RNU6-1261P-201ENST00000517194 104 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC006270.2-201ENST00000578523 652 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RN7SL426P-201ENST00000579106 295 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 MIR5682-201ENST00000584864 76 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 CKS1BP3-201ENST00000600888 237 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC106782.7-201ENST00000624024 418 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC133555.5-201ENST00000624430 418 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 LINC00622-201ENST00000562811 1570 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 AC112243.1-201ENST00000623949 3851 ntBASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.99□□□□□ -1.29
LYSMD3Q7Z3D4 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms