Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RC3H1Q5TC82 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
RC3H1Q5TC82 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.03□□□□□ -1.12
RC3H1Q5TC82 AC015689.2-201ENST00000528172 1738 ntBASIC8.03□□□□□ -1.12
RC3H1Q5TC82 AP003175.1-201ENST00000641383 6658 ntBASIC8.03□□□□□ -1.12
RC3H1Q5TC82 AC114786.1-201ENST00000512892 1415 ntBASIC8.03□□□□□ -1.12
RC3H1Q5TC82 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
RC3H1Q5TC82 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RC3H1Q5TC82 DCAF13P1-201ENST00000495256 1330 ntBASIC8.03□□□□□ -1.12
RC3H1Q5TC82 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.02□□□□□ -1.12
RC3H1Q5TC82 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
RC3H1Q5TC82 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.02□□□□□ -1.12
RC3H1Q5TC82 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
RC3H1Q5TC82 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 ZNF812P-201ENST00000457674 1694 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RBMY1HP-201ENST00000382759 1389 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 Y_RNA.72-201ENST00000362894 103 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RNU6-1251P-201ENST00000364502 107 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 Y_RNA.422-201ENST00000384054 114 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RNU6-767P-201ENST00000384132 107 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 MTCYBP36-201ENST00000404146 440 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC245096.1-201ENST00000413104 546 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 HMGB3P31-201ENST00000413333 595 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 FCF1P2-201ENST00000415284 583 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AL050321.1-201ENST00000432363 400 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 LDHAP2-201ENST00000437325 985 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 OR3D1P-201ENST00000438288 955 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 ARPC3P5-201ENST00000448802 534 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC140076.1-201ENST00000449897 361 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AL513533.1-201ENST00000453728 415 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 SNRPFP4-201ENST00000456366 242 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RN7SL705P-201ENST00000481678 294 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RPS3AP14-201ENST00000483907 780 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC008629.2-201ENST00000503783 483 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 KCTD9P4-201ENST00000526766 1166 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AP001858.2-201ENST00000536213 601 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 PDCD5P1-201ENST00000543528 309 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 VN1R80P-201ENST00000597126 338 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC087283.1-201ENST00000604029 1074 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC007363.1-201ENST00000604736 620 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC124303.1-201ENST00000605703 360 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC103710.1-201ENST00000610003 901 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RNA5SP440-201ENST00000612665 119 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC079228.1-201ENST00000624774 1049 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 AL139384.2-201ENST00000613809 3590 ntBASIC8.02□□□□□ -1.13
RC3H1Q5TC82 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RC3H1Q5TC82 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 OR13C1P-202ENST00000641378 2919 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AL391262.1-201ENST00000556558 1992 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms