Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 OR1F12-201ENST00000402365 945 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AL139128.1-201ENST00000413921 941 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 NPM1P33-201ENST00000438918 872 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 RPL23AP93-201ENST00000440847 484 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC073264.2-201ENST00000448886 166 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AL591363.1-201ENST00000450091 483 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 TRBV8-1-201ENST00000481590 279 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC016687.1-201ENST00000482574 353 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 RN7SKP34-201ENST00000516142 244 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AP001781.1-201ENST00000530977 207 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC091178.1-203ENST00000584586 279 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 SNORD91B-202ENST00000608459 222 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 MIR6730-201ENST00000622213 67 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AP001002.1-201ENST00000625148 1513 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AC125257.1-201ENST00000560400 2930 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 SNORD113.2-201ENST00000364166 89 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 ATP5G1P3-201ENST00000463301 410 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 RN7SL346P-201ENST00000491561 294 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AC018442.3-201ENST00000523025 183 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 OR10D4P-201ENST00000525892 951 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 CPHL1P-201ENST00000461341 3407 ntBASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN20Q4JDL3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 LINC00622-201ENST00000562811 1570 ntBASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 CUL4AP1-201ENST00000514750 1863 ntBASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 MFSD8-216ENST00000641147 4009 ntBASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 AC079741.1-201ENST00000321498 212 ntBASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 RNU2-50P-201ENST00000410494 143 ntBASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 RN7SKP167-201ENST00000411047 285 ntBASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 MTND4LP21-201ENST00000415303 295 ntBASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN20Q4JDL3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms