Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PRELID3BP5-201ENST00000508612 460 ntBASIC4.14□□□□□ -1.75
LMO4P61968 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.14□□□□□ -1.75
LMO4P61968 BTG4P1-201ENST00000510421 183 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 AC092593.2-201ENST00000513866 913 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AC119751.5-201ENST00000514077 770 ntBASIC4.14□□□□□ -1.75
LMO4P61968 RNU6-1102P-201ENST00000516149 96 ntBASIC4.14□□□□□ -1.75
LMO4P61968 RN7SKP265-201ENST00000516448 223 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AC034205.1-201ENST00000520621 638 ntBASIC4.14□□□□□ -1.75
LMO4P61968 EEF1A1P37-201ENST00000522748 715 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AC012339.2-201ENST00000523996 453 ntBASIC4.14□□□□□ -1.75
LMO4P61968 MORF4L1P3-201ENST00000525966 950 ntBASIC4.14□□□□□ -1.75
LMO4P61968 DUXAP5-201ENST00000529668 529 ntBASIC4.14□□□□□ -1.75
LMO4P61968 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
LMO4P61968 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.14□□□□□ -1.75
LMO4P61968 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 MIR3667-201ENST00000581025 74 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 MIR4270-201ENST00000581799 70 ntBASIC4.14□□□□□ -1.75
LMO4P61968 KATNBL1P5-201ENST00000605015 517 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AL161616.1-201ENST00000611867 286 ntBASIC4.14□□□□□ -1.75
LMO4P61968 MIR6798-201ENST00000612887 67 ntBASIC4.14□□□□□ -1.75
LMO4P61968 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 AC018926.1-201ENST00000616335 435 ntBASIC4.14□□□□□ -1.75
LMO4P61968 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 OR5AC4P-202ENST00000642086 985 ntBASIC4.14□□□□□ -1.75
LMO4P61968 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 VPS35P1-201ENST00000563400 1518 ntBASIC4.14□□□□□ -1.75
LMO4P61968 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 AC099654.2-201ENST00000433031 1980 ntBASIC4.14□□□□□ -1.75
LMO4P61968 NLRP3P1-201ENST00000622303 1785 ntBASIC4.14□□□□□ -1.75
LMO4P61968 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LMO4P61968 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.13□□□□□ -1.75
LMO4P61968 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.13□□□□□ -1.75
LMO4P61968 AC007342.7-201ENST00000624610 2337 ntBASIC4.13□□□□□ -1.75
LMO4P61968 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMO4P61968 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.13□□□□□ -1.75
LMO4P61968 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMO4P61968 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMO4P61968 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMO4P61968 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMO4P61968 AC097063.1-201ENST00000426714 1797 ntBASIC4.13□□□□□ -1.75
LMO4P61968 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LMO4P61968 RNU6-1257P-201ENST00000384625 110 ntBASIC4.13□□□□□ -1.75
LMO4P61968 MIR192-201ENST00000384915 110 ntBASIC4.13□□□□□ -1.75
LMO4P61968 RNA5SP113-201ENST00000410486 84 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.13□□□□□ -1.75
LMO4P61968 MTND2P16-201ENST00000419987 799 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.13□□□□□ -1.75
LMO4P61968 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.13□□□□□ -1.75
LMO4P61968 AC093414.1-201ENST00000434712 514 ntBASIC4.13□□□□□ -1.75
LMO4P61968 MTND2P40-201ENST00000436718 841 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.13□□□□□ -1.75
LMO4P61968 RPL5P25-201ENST00000441148 775 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.13□□□□□ -1.75
LMO4P61968 Z77249.1-201ENST00000444622 1175 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AL627224.1-201ENST00000448334 444 ntBASIC4.13□□□□□ -1.75
LMO4P61968 RPL5P13-201ENST00000462840 709 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AC021205.1-201ENST00000468797 348 ntBASIC4.13□□□□□ -1.75
LMO4P61968 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.13□□□□□ -1.75
LMO4P61968 AC005412.2-201ENST00000492004 341 ntBASIC4.13□□□□□ -1.75
LMO4P61968 PRELID3BP6-201ENST00000503839 571 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AC005351.1-201ENST00000511152 786 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.13□□□□□ -1.75
LMO4P61968 AC098976.1-201ENST00000513014 541 ntBASIC4.13□□□□□ -1.75
LMO4P61968 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.13□□□□□ -1.75
LMO4P61968 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
LMO4P61968 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.13□□□□□ -1.75
LMO4P61968 AC018442.3-201ENST00000523025 183 ntBASIC4.13□□□□□ -1.75
LMO4P61968 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.13□□□□□ -1.75
LMO4P61968 HIGD1AP5-201ENST00000529959 259 ntBASIC4.13□□□□□ -1.75
LMO4P61968 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LMO4P61968 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.13□□□□□ -1.75
LMO4P61968 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.13□□□□□ -1.75
LMO4P61968 AP000619.2-201ENST00000546014 969 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.13□□□□□ -1.75
LMO4P61968 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.13□□□□□ -1.75
LMO4P61968 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.13□□□□□ -1.75
LMO4P61968 NDUFB4P11-201ENST00000560510 395 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.13□□□□□ -1.75
LMO4P61968 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMO4P61968 TVP23CP2-201ENST00000571473 623 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.13□□□□□ -1.75
LMO4P61968 MIR4330-201ENST00000579077 105 ntBASIC4.13□□□□□ -1.75
LMO4P61968 AC091042.1-201ENST00000579213 173 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms