Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC005154.2-201ENST00000438110 379 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 CACYBPP1-201ENST00000438592 684 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN18P56856 EIF4A1P11-201ENST00000451239 222 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN18P56856 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN18P56856 AC104971.1-201ENST00000495117 578 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN18P56856 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN18P56856 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN18P56856 RNA5SP360-201ENST00000516555 118 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN18P56856 SOX5P1-201ENST00000524155 1127 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN18P56856 AC137768.1-201ENST00000549998 553 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 AC133555.2-201ENST00000550213 292 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN18P56856 RN7SL802P-201ENST00000577858 299 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN18P56856 AC087283.1-201ENST00000604029 1074 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 NF1P10-201ENST00000613227 742 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 RMST_5.1-201ENST00000618704 126 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 AL133370.2-201ENST00000619934 439 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN18P56856 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CLDN18P56856 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CLDN18P56856 OR51H2P-202ENST00000641424 3046 ntBASIC4.33□□□□□ -1.72
CLDN18P56856 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CLDN18P56856 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN18P56856 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 AC104623.2-202ENST00000623477 4002 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN18P56856 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN18P56856 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLDN18P56856 AC011155.1-201ENST00000316512 456 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN18P56856 AC019155.1-201ENST00000382242 574 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AL590139.1-201ENST00000416267 400 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 RPS17P8-201ENST00000434525 335 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 RPS20P1-201ENST00000434853 354 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AC093716.1-201ENST00000435923 377 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN18P56856 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN18P56856 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN18P56856 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN18P56856 RPL31P53-201ENST00000457065 348 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN18P56856 AC006967.1-201ENST00000467608 589 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 LARP7P4-201ENST00000481075 878 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 RNU6-709P-201ENST00000517257 104 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 NPM1P35-201ENST00000533043 868 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN18P56856 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN18P56856 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN18P56856 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN18P56856 MIR5699-201ENST00000578903 90 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 AC104785.1-201ENST00000603220 588 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AC084373.1-201ENST00000603311 235 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AL136295.6-201ENST00000610486 658 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 MIR6820-201ENST00000611508 62 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 MIR6780A-201ENST00000615089 68 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 MIR6853-201ENST00000619642 74 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN18P56856 TLK1P1-201ENST00000456760 2440 ntBASIC4.32□□□□□ -1.72
CLDN18P56856 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN18P56856 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN18P56856 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms