Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC020779.1-201ENST00000478757 796 ntBASIC4.67□□□□□ -1.66
CDH11P55287 SETP6-201ENST00000479329 568 ntBASIC4.67□□□□□ -1.66
CDH11P55287 SYT14P1-201ENST00000481459 721 ntBASIC4.67□□□□□ -1.66
CDH11P55287 RPL7P40-201ENST00000481703 745 ntBASIC4.67□□□□□ -1.66
CDH11P55287 RPSAP50-201ENST00000481955 852 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH11P55287 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH11P55287 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH11P55287 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH11P55287 RNU6-941P-201ENST00000516346 108 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH11P55287 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH11P55287 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH11P55287 AC022832.1-201ENST00000530718 645 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH11P55287 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH11P55287 AC104229.1-201ENST00000561364 255 ntBASIC4.67□□□□□ -1.66
CDH11P55287 RPL10P14-201ENST00000565265 298 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH11P55287 BNIP3P40-201ENST00000596017 556 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH11P55287 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH11P55287 AC097504.2-201ENST00000608088 454 ntBASIC4.67□□□□□ -1.66
CDH11P55287 MIR7155-201ENST00000615925 56 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AC018926.1-201ENST00000616335 435 ntBASIC4.67□□□□□ -1.66
CDH11P55287 MIR6730-201ENST00000622213 67 ntBASIC4.67□□□□□ -1.66
CDH11P55287 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH11P55287 CYP4F35P-202ENST00000636121 390 ntBASIC4.67□□□□□ -1.66
CDH11P55287 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH11P55287 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CDH11P55287 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CDH11P55287 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH11P55287 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH11P55287 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
CDH11P55287 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH11P55287 AC007996.1-201ENST00000620414 2821 ntBASIC4.66□□□□□ -1.66
CDH11P55287 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 AP000568.1-201ENST00000282964 442 ntBASIC4.66□□□□□ -1.66
CDH11P55287 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 SNORA58B-201ENST00000364259 136 ntBASIC4.66□□□□□ -1.66
CDH11P55287 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH11P55287 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 OR8V1P-201ENST00000395193 873 ntBASIC4.66□□□□□ -1.66
CDH11P55287 CHMP1B2P-201ENST00000399581 597 ntBASIC4.66□□□□□ -1.66
CDH11P55287 AL024507.1-201ENST00000412741 274 ntBASIC4.66□□□□□ -1.66
CDH11P55287 RPL23AP27-201ENST00000415161 451 ntBASIC4.66□□□□□ -1.66
CDH11P55287 VN1R37P-201ENST00000419096 748 ntBASIC4.66□□□□□ -1.66
CDH11P55287 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH11P55287 RPS27P18-201ENST00000431701 247 ntBASIC4.66□□□□□ -1.66
CDH11P55287 BTF3P6-201ENST00000448054 499 ntBASIC4.66□□□□□ -1.66
CDH11P55287 RNA5SP103-201ENST00000459503 118 ntBASIC4.66□□□□□ -1.66
CDH11P55287 AC091180.1-201ENST00000462104 372 ntBASIC4.66□□□□□ -1.66
CDH11P55287 AP000942.1-201ENST00000463969 747 ntBASIC4.66□□□□□ -1.66
CDH11P55287 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH11P55287 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 AC087888.1-201ENST00000550884 1254 ntBASIC4.66□□□□□ -1.66
CDH11P55287 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH11P55287 AGGF1P9-201ENST00000561884 913 ntBASIC4.66□□□□□ -1.66
CDH11P55287 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 SNORD39.2-201ENST00000579995 76 ntBASIC4.66□□□□□ -1.66
CDH11P55287 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH11P55287 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH11P55287 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH11P55287 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 TTC39DP-201ENST00000416781 1688 ntBASIC4.66□□□□□ -1.66
CDH11P55287 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH11P55287 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDH11P55287 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH11P55287 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CDH11P55287 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH11P55287 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CDH11P55287 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH11P55287 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CDH11P55287 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CDH11P55287 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH11P55287 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH11P55287 RPL23P2-201ENST00000320371 421 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms