Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
RNF144AP50876 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF144AP50876 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF144AP50876 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RNF144AP50876 AC132219.2-201ENST00000624416 2327 ntBASIC6.76□□□□□ -1.33
RNF144AP50876 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF144AP50876 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
RNF144AP50876 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
RNF144AP50876 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF144AP50876 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
RNF144AP50876 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF144AP50876 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 AC090017.1-201ENST00000548612 1779 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 PPIAP22-201ENST00000358455 498 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RNU5E-1-201ENST00000362477 120 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RNU6-115P-201ENST00000364310 107 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RNA5SP427-201ENST00000365323 119 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 SNORA20.2-201ENST00000383922 131 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RNU6-831P-201ENST00000384548 107 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RNU6-1222P-201ENST00000384615 107 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RPL24P7-201ENST00000399435 453 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 MTCYBP4-201ENST00000401524 249 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AL592114.1-201ENST00000403842 483 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 SNORA3.1-201ENST00000408166 111 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 MTCYBP10-201ENST00000424905 650 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 SS18L2P1-201ENST00000445923 213 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 DEFA11P-201ENST00000446470 261 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 TCEAL4P1-201ENST00000453620 588 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 CACYBPP2-201ENST00000453625 678 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 Y_RNA.635-201ENST00000459041 101 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 U8.20-201ENST00000459445 131 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RPL7P15-201ENST00000461190 712 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RN7SL251P-201ENST00000464175 297 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 VN1R17P-201ENST00000472048 1090 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC040975.1-201ENST00000472104 316 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RPL12P31-201ENST00000478433 450 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RN7SL88P-201ENST00000480166 299 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 RN7SL647P-201ENST00000485429 300 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 TMEM248P1-201ENST00000510579 951 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 AP001994.1-201ENST00000527539 826 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 AL163153.1-201ENST00000554223 283 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF144AP50876 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 AC007255.2-201ENST00000604053 631 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC004839.1-201ENST00000610269 501 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 AC079597.1-201ENST00000624306 508 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF144AP50876 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.75□□□□□ -1.33
RNF144AP50876 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RNF144AP50876 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF144AP50876 AC009237.3-203ENST00000442128 3551 ntBASIC6.74□□□□□ -1.33
RNF144AP50876 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RNF144AP50876 AC091544.5-201ENST00000620192 3815 ntBASIC6.74□□□□□ -1.33
RNF144AP50876 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF144AP50876 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF144AP50876 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RNF144AP50876 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF144AP50876 PPBPP2-201ENST00000513150 1362 ntBASIC6.74□□□□□ -1.33
RNF144AP50876 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF144AP50876 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF144AP50876 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms