Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC092474.3-201ENST00000603022 568 ntBASIC5.1□□□□□ -1.59
LHX1P48742 AC098935.2-201ENST00000604222 466 ntBASIC5.1□□□□□ -1.59
LHX1P48742 AC017002.4-201ENST00000604721 1525 ntBASIC5.1□□□□□ -1.59
LHX1P48742 RPL21P136-201ENST00000605378 396 ntBASIC5.1□□□□□ -1.59
LHX1P48742 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 AL442639.1-201ENST00000625030 1899 ntBASIC5.09□□□□□ -1.59
LHX1P48742 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 AC025574.1-201ENST00000554784 1653 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC019072.1-201ENST00000604535 1551 ntBASIC5.09□□□□□ -1.59
LHX1P48742 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.09□□□□□ -1.59
LHX1P48742 AC009501.3-201ENST00000605001 1352 ntBASIC5.09□□□□□ -1.59
LHX1P48742 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LHX1P48742 AL034403.1-201ENST00000399414 885 ntBASIC5.09□□□□□ -1.59
LHX1P48742 NPM1P40-201ENST00000412758 733 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 RPS26P4-201ENST00000431743 355 ntBASIC5.09□□□□□ -1.59
LHX1P48742 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.09□□□□□ -1.59
LHX1P48742 HMGB3P10-201ENST00000434734 572 ntBASIC5.09□□□□□ -1.59
LHX1P48742 MTCYBP29-201ENST00000436327 1006 ntBASIC5.09□□□□□ -1.59
LHX1P48742 CYCSP11-201ENST00000436426 315 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC069277.2-201ENST00000454211 432 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.09□□□□□ -1.59
LHX1P48742 HMGB1P3-201ENST00000502802 616 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC073358.1-201ENST00000505671 684 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC091868.1-201ENST00000508746 304 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC021146.7-201ENST00000509604 775 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 AC034244.2-201ENST00000514668 858 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 HMGB1P46-201ENST00000520062 610 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AC138832.1-201ENST00000522871 556 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.09□□□□□ -1.59
LHX1P48742 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.09□□□□□ -1.59
LHX1P48742 AC010503.3-201ENST00000594355 540 ntBASIC5.09□□□□□ -1.59
LHX1P48742 SNX6P1-201ENST00000601728 1224 ntBASIC5.09□□□□□ -1.59
LHX1P48742 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.09□□□□□ -1.59
LHX1P48742 MIR6820-201ENST00000611508 62 ntBASIC5.09□□□□□ -1.59
LHX1P48742 CR589904.2-201ENST00000612533 440 ntBASIC5.09□□□□□ -1.59
LHX1P48742 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 AC073869.10-201ENST00000642016 354 ntBASIC5.09□□□□□ -1.59
LHX1P48742 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX1P48742 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LHX1P48742 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LHX1P48742 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LHX1P48742 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX1P48742 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX1P48742 RBPJP2-201ENST00000618187 1444 ntBASIC5.08□□□□□ -1.6
LHX1P48742 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX1P48742 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.08□□□□□ -1.6
LHX1P48742 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX1P48742 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LHX1P48742 CYB5AP4-201ENST00000396692 399 ntBASIC5.08□□□□□ -1.6
LHX1P48742 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.08□□□□□ -1.6
LHX1P48742 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 AL138878.2-201ENST00000440581 1241 ntBASIC5.08□□□□□ -1.6
LHX1P48742 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 RPL36AP15-201ENST00000444514 266 ntBASIC5.08□□□□□ -1.6
LHX1P48742 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 AC073264.2-201ENST00000448886 166 ntBASIC5.08□□□□□ -1.6
LHX1P48742 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.08□□□□□ -1.6
LHX1P48742 AC010326.1-201ENST00000462726 602 ntBASIC5.08□□□□□ -1.6
LHX1P48742 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 OR9N1P-202ENST00000494289 481 ntBASIC5.08□□□□□ -1.6
LHX1P48742 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LHX1P48742 AC109635.6-201ENST00000525487 1113 ntBASIC5.08□□□□□ -1.6
LHX1P48742 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.08□□□□□ -1.6
LHX1P48742 AC137768.1-201ENST00000549998 553 ntBASIC5.08□□□□□ -1.6
LHX1P48742 CKS1BP1-201ENST00000555221 240 ntBASIC5.08□□□□□ -1.6
LHX1P48742 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX1P48742 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.08□□□□□ -1.6
LHX1P48742 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.08□□□□□ -1.6
LHX1P48742 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.08□□□□□ -1.6
LHX1P48742 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LHX1P48742 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LHX1P48742 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.08□□□□□ -1.6
LHX1P48742 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX1P48742 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.08□□□□□ -1.6
LHX1P48742 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.08□□□□□ -1.6
LHX1P48742 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.07□□□□□ -1.6
LHX1P48742 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms