Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.76□□□□□ -1.65
HTTP42858 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.76□□□□□ -1.65
HTTP42858 AC005255.1-201ENST00000593748 216 ntBASIC4.76□□□□□ -1.65
HTTP42858 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HTTP42858 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HTTP42858 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HTTP42858 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 RPS20P14-201ENST00000412545 360 ntBASIC4.75□□□□□ -1.65
HTTP42858 OR4F13P-201ENST00000428478 931 ntBASIC4.75□□□□□ -1.65
HTTP42858 RPS26P28-201ENST00000470806 348 ntBASIC4.75□□□□□ -1.65
HTTP42858 UBE2DNL-203ENST00000474922 222 ntBASIC4.75□□□□□ -1.65
HTTP42858 RPS29P2-201ENST00000479278 136 ntBASIC4.75□□□□□ -1.65
HTTP42858 ADAD1P2-201ENST00000588476 646 ntBASIC4.75□□□□□ -1.65
HTTP42858 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 CASC19-206ENST00000641028 1430 ntBASIC4.75□□□□□ -1.65
HTTP42858 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HTTP42858 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.75□□□□□ -1.65
HTTP42858 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.75□□□□□ -1.65
HTTP42858 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HTTP42858 RNU6-213P-201ENST00000384051 104 ntBASIC4.75□□□□□ -1.65
HTTP42858 RPL23AP81-201ENST00000455252 467 ntBASIC4.75□□□□□ -1.65
HTTP42858 AC008155.2-201ENST00000464337 397 ntBASIC4.75□□□□□ -1.65
HTTP42858 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.75□□□□□ -1.65
HTTP42858 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.75□□□□□ -1.65
HTTP42858 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.75□□□□□ -1.65
HTTP42858 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.75□□□□□ -1.65
HTTP42858 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HTTP42858 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HTTP42858 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HTTP42858 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HTTP42858 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.75□□□□□ -1.65
HTTP42858 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
HTTP42858 CASC19-204ENST00000641001 2055 ntBASIC4.75□□□□□ -1.65
HTTP42858 RNA5SP307-201ENST00000362863 116 ntBASIC4.75□□□□□ -1.65
HTTP42858 MIR1289-1-201ENST00000408836 144 ntBASIC4.75□□□□□ -1.65
HTTP42858 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.75□□□□□ -1.65
HTTP42858 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.75□□□□□ -1.65
HTTP42858 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.75□□□□□ -1.65
HTTP42858 AC093853.1-201ENST00000515689 483 ntBASIC4.75□□□□□ -1.65
HTTP42858 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.75□□□□□ -1.65
HTTP42858 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.74□□□□□ -1.65
HTTP42858 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.74□□□□□ -1.65
HTTP42858 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC4.74□□□□□ -1.65
HTTP42858 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
HTTP42858 AL355852.1-201ENST00000454081 1771 ntBASIC4.74□□□□□ -1.65
HTTP42858 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
HTTP42858 AL031595.3-201ENST00000624919 14262 ntBASIC4.74□□□□□ -1.65
HTTP42858 RNVU1-14-201ENST00000384770 164 ntBASIC4.74□□□□□ -1.65
HTTP42858 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.74□□□□□ -1.65
HTTP42858 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.74□□□□□ -1.65
HTTP42858 MIR5684-201ENST00000585074 65 ntBASIC4.74□□□□□ -1.65
HTTP42858 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.74□□□□□ -1.65
HTTP42858 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HTTP42858 RPL7P4-203ENST00000430239 730 ntBASIC4.74□□□□□ -1.65
HTTP42858 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.74□□□□□ -1.65
HTTP42858 GAPDHP36-201ENST00000480688 918 ntBASIC4.74□□□□□ -1.65
HTTP42858 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.74□□□□□ -1.65
HTTP42858 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.74□□□□□ -1.65
HTTP42858 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.74□□□□□ -1.65
HTTP42858 AC025175.1-201ENST00000606482 759 ntBASIC4.74□□□□□ -1.65
HTTP42858 AC055839.1-201ENST00000634467 498 ntBASIC4.74□□□□□ -1.65
HTTP42858 OR6C71P-202ENST00000641886 1107 ntBASIC4.74□□□□□ -1.65
HTTP42858 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 AC120036.2-201ENST00000509729 1474 ntBASIC4.74□□□□□ -1.65
HTTP42858 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 ERCC6-202ENST00000374127 1782 ntBASIC4.74□□□□□ -1.65
HTTP42858 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HTTP42858 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.73□□□□□ -1.65
HTTP42858 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.73□□□□□ -1.65
HTTP42858 AC012671.1-201ENST00000451912 203 ntBASIC4.73□□□□□ -1.65
HTTP42858 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.73□□□□□ -1.65
HTTP42858 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.73□□□□□ -1.65
HTTP42858 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.73□□□□□ -1.65
HTTP42858 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.73□□□□□ -1.65
HTTP42858 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HTTP42858 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC4.73□□□□□ -1.65
HTTP42858 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 SNORA74C-2-201ENST00000411179 201 ntBASIC4.73□□□□□ -1.65
HTTP42858 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms