Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FDFT1P37268 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.77□□□□□ -1.65
FDFT1P37268 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.76□□□□□ -1.65
FDFT1P37268 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.76□□□□□ -1.65
FDFT1P37268 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.76□□□□□ -1.65
FDFT1P37268 AC092642.1-201ENST00000392417 425 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.76□□□□□ -1.65
FDFT1P37268 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 RN7SKP267-201ENST00000410381 285 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 MTND4LP13-201ENST00000425022 298 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 RPL21P43-201ENST00000425440 472 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.76□□□□□ -1.65
FDFT1P37268 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.76□□□□□ -1.65
FDFT1P37268 OR2B7P-201ENST00000429302 934 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.76□□□□□ -1.65
FDFT1P37268 NRBF2P3-201ENST00000432731 865 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 AL589765.3-201ENST00000446084 462 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
FDFT1P37268 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.76□□□□□ -1.65
FDFT1P37268 OR5AZ1P-201ENST00000527448 943 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.76□□□□□ -1.65
FDFT1P37268 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.76□□□□□ -1.65
FDFT1P37268 GSTP1P1-201ENST00000548078 319 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.76□□□□□ -1.65
FDFT1P37268 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.76□□□□□ -1.65
FDFT1P37268 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.76□□□□□ -1.65
FDFT1P37268 SULT1C2P2-201ENST00000562517 294 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 BGLT3-201ENST00000564523 994 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 ATP5J2P6-201ENST00000565203 266 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.76□□□□□ -1.65
FDFT1P37268 LINC01109-201ENST00000603837 3081 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC091979.2-201ENST00000607514 214 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.76□□□□□ -1.65
FDFT1P37268 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 AC005086.4-201ENST00000623065 213 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.76□□□□□ -1.65
FDFT1P37268 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 AC107027.3-201ENST00000565095 3473 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 AP001002.1-201ENST00000625148 1513 ntBASIC4.76□□□□□ -1.65
FDFT1P37268 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
FDFT1P37268 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
FDFT1P37268 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FDFT1P37268 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
FDFT1P37268 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 OR51H2P-202ENST00000641424 3046 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.75□□□□□ -1.65
FDFT1P37268 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.75□□□□□ -1.65
FDFT1P37268 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
FDFT1P37268 AC009237.10-201ENST00000414112 510 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.75□□□□□ -1.65
FDFT1P37268 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.75□□□□□ -1.65
FDFT1P37268 AC013470.3-201ENST00000420252 1194 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 CYCSP11-201ENST00000436426 315 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 RAB28P3-201ENST00000448325 597 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AC022431.1-201ENST00000450941 438 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.75□□□□□ -1.65
FDFT1P37268 RPL7AP28-201ENST00000464513 571 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AC105918.1-201ENST00000474399 838 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 RN7SL817P-201ENST00000480777 288 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AC108022.1-201ENST00000493466 478 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AL133372.1-201ENST00000493565 745 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AK4P6-201ENST00000505168 528 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AC098799.3-201ENST00000506095 438 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.75□□□□□ -1.65
FDFT1P37268 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.75□□□□□ -1.65
FDFT1P37268 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.75□□□□□ -1.65
FDFT1P37268 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.75□□□□□ -1.65
FDFT1P37268 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.75□□□□□ -1.65
FDFT1P37268 RN7SL652P-201ENST00000577769 300 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.75□□□□□ -1.65
FDFT1P37268 AC096553.1-201ENST00000605169 829 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AL592494.3-201ENST00000609485 464 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 AP003499.2-201ENST00000624100 483 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.75□□□□□ -1.65
FDFT1P37268 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.75□□□□□ -1.65
FDFT1P37268 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 IRF5P1-201ENST00000504852 2164 ntBASIC4.75□□□□□ -1.65
FDFT1P37268 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
FDFT1P37268 HSPD1P14-201ENST00000432666 1618 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms