Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC005229.2-201ENST00000456995 399 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC092989.1-201ENST00000481235 277 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC068522.1-201ENST00000482895 345 ntBASIC7.31□□□□□ -1.24
RFX1P22670 HMGB1P36-201ENST00000487709 576 ntBASIC7.31□□□□□ -1.24
RFX1P22670 RPS27P20-201ENST00000492051 246 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC023818.1-201ENST00000498379 384 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC114981.1-201ENST00000503897 678 ntBASIC7.31□□□□□ -1.24
RFX1P22670 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX1P22670 ARL2BPP6-201ENST00000512757 439 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX1P22670 OR52H2P-201ENST00000514607 902 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.31□□□□□ -1.24
RFX1P22670 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX1P22670 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.31□□□□□ -1.24
RFX1P22670 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RFX1P22670 AL389895.1-201ENST00000554127 252 ntBASIC7.31□□□□□ -1.24
RFX1P22670 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.31□□□□□ -1.24
RFX1P22670 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.31□□□□□ -1.24
RFX1P22670 EIF5A2P1-201ENST00000564027 460 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC106785.4-201ENST00000569492 412 ntBASIC7.31□□□□□ -1.24
RFX1P22670 MIR3913-1-201ENST00000577744 102 ntBASIC7.31□□□□□ -1.24
RFX1P22670 RN7SL230P-201ENST00000580835 303 ntBASIC7.31□□□□□ -1.24
RFX1P22670 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RFX1P22670 AC006504.3-201ENST00000586818 523 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AL161729.4-201ENST00000604650 476 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC243654.2-201ENST00000612843 443 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AL158209.2-201ENST00000619266 216 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC136475.10-201ENST00000620253 385 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC009120.7-201ENST00000623452 780 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC005618.4-201ENST00000625053 554 ntBASIC7.31□□□□□ -1.24
RFX1P22670 FAM157B-203ENST00000639350 358 ntBASIC7.31□□□□□ -1.24
RFX1P22670 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX1P22670 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
RFX1P22670 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX1P22670 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RFX1P22670 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RFX1P22670 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX1P22670 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 AC021242.1-201ENST00000507315 2035 ntBASIC7.3□□□□□ -1.24
RFX1P22670 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 AC074141.1-201ENST00000588129 2995 ntBASIC7.3□□□□□ -1.24
RFX1P22670 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 AL359195.2-201ENST00000623657 4412 ntBASIC7.3□□□□□ -1.24
RFX1P22670 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.3□□□□□ -1.24
RFX1P22670 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 RNU1-55P-201ENST00000365510 158 ntBASIC7.3□□□□□ -1.24
RFX1P22670 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RFX1P22670 U8.14-201ENST00000390843 143 ntBASIC7.3□□□□□ -1.24
RFX1P22670 RNU2-28P-201ENST00000410457 189 ntBASIC7.3□□□□□ -1.24
RFX1P22670 RN7SKP188-201ENST00000410789 317 ntBASIC7.3□□□□□ -1.24
RFX1P22670 RN7SKP91-201ENST00000410852 288 ntBASIC7.3□□□□□ -1.24
RFX1P22670 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC7.3□□□□□ -1.24
RFX1P22670 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 AHCYP8-201ENST00000425108 209 ntBASIC7.3□□□□□ -1.24
RFX1P22670 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AC239367.3-201ENST00000428996 814 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.3□□□□□ -1.24
RFX1P22670 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 HMGB1P31-201ENST00000437242 427 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AC073614.1-201ENST00000438690 650 ntBASIC7.3□□□□□ -1.24
RFX1P22670 RABEPKP1-201ENST00000440529 1026 ntBASIC7.3□□□□□ -1.24
RFX1P22670 SNRPEP8-201ENST00000442866 260 ntBASIC7.3□□□□□ -1.24
RFX1P22670 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.3□□□□□ -1.24
RFX1P22670 MTND5P20-201ENST00000448677 143 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 RPS15AP1-201ENST00000457423 391 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RFX1P22670 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 EIF3KP3-201ENST00000514461 639 ntBASIC7.3□□□□□ -1.24
RFX1P22670 TPM3P3-201ENST00000521343 354 ntBASIC7.3□□□□□ -1.24
RFX1P22670 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.3□□□□□ -1.24
RFX1P22670 OR4A12P-201ENST00000530847 918 ntBASIC7.3□□□□□ -1.24
RFX1P22670 TOMM20P1-201ENST00000534518 427 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX1P22670 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC7.3□□□□□ -1.24
RFX1P22670 NMNAT1P1-201ENST00000554095 876 ntBASIC7.3□□□□□ -1.24
RFX1P22670 MT1CP-201ENST00000567054 174 ntBASIC7.3□□□□□ -1.24
RFX1P22670 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 AC112191.3-201ENST00000604371 277 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AC104458.1-201ENST00000608243 463 ntBASIC7.3□□□□□ -1.24
RFX1P22670 AL137000.1-201ENST00000610528 1244 ntBASIC7.3□□□□□ -1.24
RFX1P22670 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.3□□□□□ -1.24
RFX1P22670 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.3□□□□□ -1.24
RFX1P22670 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 TRIM51GP-201ENST00000534741 1350 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms