Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATF3P18847 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.78□□□□□ -1.32
ATF3P18847 MT-TP-201ENST00000387461 68 ntBASIC6.78□□□□□ -1.32
ATF3P18847 RNU6-1320P-201ENST00000390838 107 ntBASIC6.78□□□□□ -1.32
ATF3P18847 RNU6-1269P-201ENST00000391139 107 ntBASIC6.78□□□□□ -1.32
ATF3P18847 TAF9BP2-201ENST00000400856 499 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AL390316.1-201ENST00000406279 553 ntBASIC6.78□□□□□ -1.32
ATF3P18847 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.78□□□□□ -1.32
ATF3P18847 RNU2-22P-201ENST00000411266 212 ntBASIC6.78□□□□□ -1.32
ATF3P18847 UBE2D3P3-201ENST00000426992 425 ntBASIC6.78□□□□□ -1.32
ATF3P18847 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATF3P18847 AL158053.1-201ENST00000441503 453 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.78□□□□□ -1.32
ATF3P18847 HMGB1P4-201ENST00000455362 567 ntBASIC6.78□□□□□ -1.32
ATF3P18847 CYCSP34-201ENST00000458172 304 ntBASIC6.78□□□□□ -1.32
ATF3P18847 SNORA84-201ENST00000459229 133 ntBASIC6.78□□□□□ -1.32
ATF3P18847 RNU6-599P-201ENST00000459383 107 ntBASIC6.78□□□□□ -1.32
ATF3P18847 RNU6-1193P-201ENST00000459461 107 ntBASIC6.78□□□□□ -1.32
ATF3P18847 RPS12P31-201ENST00000491419 398 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AC007016.1-201ENST00000512110 244 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.78□□□□□ -1.32
ATF3P18847 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.78□□□□□ -1.32
ATF3P18847 IGHV3-63-201ENST00000518422 341 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.78□□□□□ -1.32
ATF3P18847 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.78□□□□□ -1.32
ATF3P18847 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.78□□□□□ -1.32
ATF3P18847 BUD31P1-201ENST00000521828 359 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.78□□□□□ -1.32
ATF3P18847 MED28P5-201ENST00000528254 438 ntBASIC6.78□□□□□ -1.32
ATF3P18847 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATF3P18847 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.78□□□□□ -1.32
ATF3P18847 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.78□□□□□ -1.32
ATF3P18847 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.78□□□□□ -1.32
ATF3P18847 AC022726.1-201ENST00000587475 207 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AC015712.7-201ENST00000615211 635 ntBASIC6.78□□□□□ -1.32
ATF3P18847 ZYXP1-201ENST00000617638 118 ntBASIC6.78□□□□□ -1.32
ATF3P18847 RNU6-368P-201ENST00000620928 107 ntBASIC6.78□□□□□ -1.32
ATF3P18847 RNU6-538P-201ENST00000622329 107 ntBASIC6.78□□□□□ -1.32
ATF3P18847 AC034229.5-201ENST00000624258 185 ntBASIC6.78□□□□□ -1.32
ATF3P18847 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.78□□□□□ -1.32
ATF3P18847 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATF3P18847 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.78□□□□□ -1.32
ATF3P18847 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ATF3P18847 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATF3P18847 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
ATF3P18847 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATF3P18847 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.78□□□□□ -1.32
ATF3P18847 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.78□□□□□ -1.32
ATF3P18847 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ATF3P18847 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
ATF3P18847 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 AL359715.4-201ENST00000606629 1436 ntBASIC6.77□□□□□ -1.33
ATF3P18847 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.77□□□□□ -1.33
ATF3P18847 AC007342.7-201ENST00000624610 2337 ntBASIC6.77□□□□□ -1.33
ATF3P18847 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 RPS26P38-201ENST00000414476 348 ntBASIC6.77□□□□□ -1.33
ATF3P18847 TBCAP2-201ENST00000416175 326 ntBASIC6.77□□□□□ -1.33
ATF3P18847 AC092651.1-201ENST00000426110 312 ntBASIC6.77□□□□□ -1.33
ATF3P18847 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 CYCSP11-201ENST00000436426 315 ntBASIC6.77□□□□□ -1.33
ATF3P18847 RPL5P12-201ENST00000477071 851 ntBASIC6.77□□□□□ -1.33
ATF3P18847 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 NPM1P29-201ENST00000483112 803 ntBASIC6.77□□□□□ -1.33
ATF3P18847 AC104971.1-201ENST00000495117 578 ntBASIC6.77□□□□□ -1.33
ATF3P18847 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ATF3P18847 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 AC023158.1-201ENST00000561632 1025 ntBASIC6.77□□□□□ -1.33
ATF3P18847 AC084783.1-201ENST00000565846 910 ntBASIC6.77□□□□□ -1.33
ATF3P18847 CBX3P2-202ENST00000583365 535 ntBASIC6.77□□□□□ -1.33
ATF3P18847 MIR3138-201ENST00000585238 82 ntBASIC6.77□□□□□ -1.33
ATF3P18847 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 AC100847.1-201ENST00000611316 481 ntBASIC6.77□□□□□ -1.33
ATF3P18847 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.77□□□□□ -1.33
ATF3P18847 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 AP000866.6-201ENST00000638898 3579 ntBASIC6.77□□□□□ -1.33
ATF3P18847 TCP1P3-201ENST00000414406 1498 ntBASIC6.77□□□□□ -1.33
ATF3P18847 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.77□□□□□ -1.33
ATF3P18847 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.77□□□□□ -1.33
ATF3P18847 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ATF3P18847 ZNF90P1-201ENST00000480493 1951 ntBASIC6.77□□□□□ -1.33
ATF3P18847 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATF3P18847 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATF3P18847 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms