Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 RNU2-22P-201ENST00000411266 212 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 GSTM3P2-201ENST00000412746 530 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AC062016.2-201ENST00000420950 676 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 NRBF2P3-201ENST00000432731 865 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 LYPLA1P1-201ENST00000434514 622 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 MTND4LP12-201ENST00000448237 295 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 OR1H1P-201ENST00000448731 937 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 SCARNA10-201ENST00000459255 330 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 RPL7AP28-201ENST00000464513 571 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AC093763.2-201ENST00000505334 1223 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 PPBPP1-201ENST00000510807 373 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 RFPL4AP5-201ENST00000514977 504 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AC021006.3-201ENST00000530771 192 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 BNIP3P32-201ENST00000600015 554 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AC018445.2-201ENST00000622987 260 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
TRIM49D1C9J1S8 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.53□□□□□ -1.69
TRIM49D1C9J1S8 BTBD10P1-201ENST00000549824 1352 ntBASIC4.53□□□□□ -1.69
TRIM49D1C9J1S8 INTS6P1-201ENST00000504674 2530 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 RNA5SP305-201ENST00000362665 119 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 MIR105-2-201ENST00000385083 81 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AL078604.1-201ENST00000404609 466 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 UBTFL3-201ENST00000418934 1024 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 RAD23BP1-201ENST00000421404 1227 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC073335.1-201ENST00000427776 363 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 BRWD1P3-201ENST00000428816 390 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 DYNLL1P7-201ENST00000429273 258 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 RNU7-157P-201ENST00000459600 66 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC092905.1-201ENST00000467527 949 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 UBTFL6-201ENST00000477929 1024 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC098799.1-201ENST00000504752 800 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AL110118.1-201ENST00000553543 400 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AP005901.4-201ENST00000577336 569 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 U3.53-201ENST00000628922 216 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 OR51H2P-202ENST00000641424 3046 ntBASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM49D1C9J1S8 AC120338.1-201ENST00000625074 1541 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 SPTLC1P2-201ENST00000407089 121 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC004690.1-201ENST00000418216 328 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC234781.4-201ENST00000419384 244 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC004074.1-201ENST00000421810 1063 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 RBMY2TP-201ENST00000451162 947 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 DDX39BP2-208ENST00000453923 258 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 RPSAP50-201ENST00000481955 852 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC004815.1-201ENST00000484185 331 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC007016.1-201ENST00000512110 244 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AL671862.1-201ENST00000515851 349 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 BPIFA4P-203ENST00000603168 689 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AL160290.3-201ENST00000604869 165 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms