Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 RNY4P37-201ENST00000516225 96 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 SNORA18.6-201ENST00000516792 115 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 MTND1P35-201ENST00000526739 508 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 HMGB1P33-201ENST00000563485 527 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 SNORD39.2-201ENST00000579995 76 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 MIR1273E-201ENST00000581165 102 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC073091.2-201ENST00000603205 907 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC011447.7-201ENST00000624228 1590 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC100871.1-201ENST00000507871 1456 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 OR52B3P-201ENST00000314715 928 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 Y_RNA.529-201ENST00000384586 119 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 USP9YP27-201ENST00000418455 438 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 GSTA6P-201ENST00000424144 582 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AL627308.1-201ENST00000435693 821 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC104850.1-201ENST00000435940 476 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AL034399.1-201ENST00000451535 380 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 PMCHL2-203ENST00000457791 237 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 RN7SL643P-201ENST00000471845 291 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC079080.1-201ENST00000479841 822 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC098583.1-201ENST00000480875 255 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 RPS23P1-201ENST00000491662 432 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 RPL7L1P13-201ENST00000511702 739 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 RNA5SP206-201ENST00000516703 121 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 Y_RNA.704-201ENST00000516851 102 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AP006245.2-201ENST00000522004 300 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AP001893.2-201ENST00000526949 202 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC079600.1-201ENST00000550326 297 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 MIR4489-201ENST00000578869 62 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC245014.3-201ENST00000618589 347 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AP001264.1-201ENST00000620602 703 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 CRYM-AS1-204ENST00000637983 556 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 AC015689.2-201ENST00000528172 1738 ntBASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
ZC3H4Q9UPT8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 RBPJP7-201ENST00000442803 1447 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 RBPJP5-201ENST00000449433 1447 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 OR4K15-201ENST00000305051 1216 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 RNA5SP105-201ENST00000391123 113 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 AC025750.1-201ENST00000399891 379 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 OR7E101P-201ENST00000400428 513 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 GSTA9P-201ENST00000406231 611 ntBASIC7.9□□□□□ -1.14
ZC3H4Q9UPT8 MIR1302-11-201ENST00000408051 138 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms