Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLIP2Q9UDT6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AL590240.1-201ENST00000334118 313 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AL807761.1-201ENST00000417622 171 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 TMBIM7P-201ENST00000418074 855 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AC245028.1-201ENST00000423259 256 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AC092447.2-201ENST00000435487 669 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 CYCSP34-201ENST00000458172 304 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 RN7SL517P-201ENST00000462240 305 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 RPL12P20-201ENST00000475538 479 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 RN7SL459P-201ENST00000481078 302 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AC104971.1-201ENST00000495117 578 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 RN7SL558P-201ENST00000497468 299 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 RNA5SP464-201ENST00000516251 108 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 BUD31P1-201ENST00000521828 359 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AL049830.4-201ENST00000555149 351 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 CYCSP40-201ENST00000575927 294 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 AC010615.3-201ENST00000597319 394 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.64□□□□□ -1.51
CLIP2Q9UDT6 THAP12P8-201ENST00000447914 2115 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 TLK1P1-201ENST00000456760 2440 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC092162.1-201ENST00000432828 434 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 RPS17P8-201ENST00000434525 335 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 NDUFA12P1-201ENST00000455914 406 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 RN7SL354P-201ENST00000469282 294 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC020890.1-201ENST00000491837 504 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC093720.1-201ENST00000505681 714 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC091868.1-201ENST00000508746 304 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 Y_RNA.719-201ENST00000517156 106 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 DUX4L52-201ENST00000549363 777 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 RN7SL802P-201ENST00000577858 299 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 MIR5699-201ENST00000578903 90 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC234771.5-201ENST00000600161 514 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 RNF138P2-201ENST00000603490 592 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 AC008745.1-201ENST00000604064 271 ntBASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP2Q9UDT6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 RN7SKP106-201ENST00000410832 272 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC119751.6-201ENST00000416712 186 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC092570.3-201ENST00000420113 693 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC069213.2-201ENST00000420238 366 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 LINC00993-201ENST00000420453 540 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 FABP7P1-201ENST00000424004 391 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AL359265.2-201ENST00000434367 631 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 TPT1P13-201ENST00000449760 499 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AL445433.1-201ENST00000457507 257 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 MTCO3P42-201ENST00000509488 518 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 MTCO3P39-201ENST00000514812 518 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 RNU6-709P-201ENST00000517257 104 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 OR5M2P-201ENST00000529003 936 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC018552.1-201ENST00000562099 811 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC093249.4-201ENST00000564755 259 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC068790.7-201ENST00000602347 528 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms