Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL20A1Q9P218 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL20A1Q9P218 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC233289.1-201ENST00000403700 508 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AL034374.1-201ENST00000406329 351 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC105402.1-201ENST00000413336 545 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 CHEK2P3-201ENST00000416118 248 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 SETP9-201ENST00000423837 832 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 RPL19P16-201ENST00000433839 588 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 ARAFP2-201ENST00000440565 559 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AL161722.1-201ENST00000446972 1032 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AL009048.1-201ENST00000450437 298 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 GTF2IP12-201ENST00000456547 356 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC022133.1-201ENST00000490961 571 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 COX6B1P5-201ENST00000509843 249 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 BTF3P13-201ENST00000513224 490 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 RNU6-1004P-201ENST00000516584 111 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AL132857.1-201ENST00000555180 708 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 MTCYBP23-201ENST00000558717 1102 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 MIR3934-201ENST00000579806 107 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC011472.4-201ENST00000615848 491 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC140725.3-201ENST00000616193 880 ntBASIC5.82□□□□□ -1.48
COL20A1Q9P218 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL20A1Q9P218 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL20A1Q9P218 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL20A1Q9P218 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL20A1Q9P218 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 CASC19-221ENST00000641309 1382 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 BCORP1-203ENST00000513194 5093 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 RNU5B-1-201ENST00000363286 116 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 U6.112-201ENST00000384129 70 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 GAPDHP15-201ENST00000398586 975 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AP000357.1-201ENST00000409926 1165 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 MTCO3P4-201ENST00000419236 787 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AL360081.1-201ENST00000428299 555 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AL049745.1-201ENST00000433953 286 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC090018.1-201ENST00000434369 367 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 MTND2P2-201ENST00000434633 945 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 ELOCP11-201ENST00000436690 332 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC000041.1-201ENST00000439655 175 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 ELOCP16-201ENST00000444494 332 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 IGHV5-78-201ENST00000450948 295 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 RPS3AP6-201ENST00000484430 795 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC083982.1-201ENST00000485679 344 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC010350.1-201ENST00000504908 231 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC114322.1-201ENST00000506771 926 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL20A1Q9P218 RN7SKP265-201ENST00000516448 223 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 RN7SKP260-201ENST00000516907 149 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 MORF4L1P3-201ENST00000525966 950 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL20A1Q9P218 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 GCSHP4-201ENST00000538792 439 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 ZNF971P-201ENST00000562068 1249 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AGGF1P5-201ENST00000567900 919 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 MIR4789-201ENST00000577469 82 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 AL162574.1-201ENST00000615702 950 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms