Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC021660.1-201ENST00000465006 554 ntBASIC6.9□□□□□ -1.31
SCAPERQ9BY12 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 AL359219.2-201ENST00000555184 348 ntBASIC6.9□□□□□ -1.31
SCAPERQ9BY12 AC006349.1-201ENST00000555526 235 ntBASIC6.9□□□□□ -1.31
SCAPERQ9BY12 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 LARP1BP1-201ENST00000506036 1359 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 PCNPP4-201ENST00000414817 517 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 COX6CP15-201ENST00000426313 211 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 RRM2P4-201ENST00000441721 562 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 RNU1-45P-201ENST00000517191 141 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 HNRNPRP2-201ENST00000528421 743 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AC090515.3-201ENST00000560431 315 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AC010547.7-201ENST00000570323 333 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AC113403.1-201ENST00000604910 193 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AC008833.1-201ENST00000611633 691 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 AC011815.3-201ENST00000624194 473 ntBASIC6.89□□□□□ -1.31
SCAPERQ9BY12 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCAPERQ9BY12 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AL161909.1-201ENST00000397390 712 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 CYCSP19-201ENST00000411715 316 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 OR8G2P-201ENST00000412796 908 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AL356095.1-201ENST00000417217 199 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AL139095.3-201ENST00000419672 1203 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AL132838.2-201ENST00000492041 314 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AL133372.1-201ENST00000493565 745 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 AC108064.1-201ENST00000513791 460 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 RPL7P50-201ENST00000600588 727 ntBASIC6.88□□□□□ -1.31
SCAPERQ9BY12 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCAPERQ9BY12 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 MIR554-201ENST00000384874 96 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 RNU6-628P-201ENST00000410675 107 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 EIF4A1P3-201ENST00000411521 244 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 RPL23AP38-201ENST00000423801 469 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 RN7SL132P-201ENST00000478131 296 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 AC098799.3-201ENST00000506095 438 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 AC026782.2-201ENST00000510845 636 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 RPL23AP53-201ENST00000521854 457 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 MIR6867-201ENST00000610636 67 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 OR2L1P-202ENST00000641567 1023 ntBASIC6.87□□□□□ -1.31
SCAPERQ9BY12 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCAPERQ9BY12 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 RN7SKP202-201ENST00000410439 330 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 AC007738.1-201ENST00000413892 348 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 RPL7P33-201ENST00000444159 742 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 RPL23AP43-201ENST00000446445 471 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 VN1R34P-201ENST00000447387 883 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 RN7SL691P-201ENST00000494487 301 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 PARP4P3-201ENST00000510265 317 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 RN7SL703P-201ENST00000578485 302 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 RN7SL600P-201ENST00000581811 299 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 TMEM30CP-203ENST00000637814 1035 ntBASIC6.86□□□□□ -1.31
SCAPERQ9BY12 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms