Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC28BQ9BUN5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC28BQ9BUN5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC28BQ9BUN5 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
CCDC28BQ9BUN5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC28BQ9BUN5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC28BQ9BUN5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC093535.2-201ENST00000624769 2326 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 OR56B2P-201ENST00000317102 954 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 U3.2-201ENST00000362981 210 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 RNA5SP513-201ENST00000364648 118 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 RNU6-883P-201ENST00000384597 107 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 VN1R12P-201ENST00000403778 876 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 RPL23AP48-201ENST00000406913 488 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 RBMY2TP-201ENST00000451162 947 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 ATP5G1P3-201ENST00000463301 410 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 RN7SL184P-201ENST00000488308 297 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 COX6B1P5-201ENST00000509843 249 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 PPBPP1-201ENST00000510807 373 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 OR7E128P-201ENST00000532736 1024 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 CD24P2-201ENST00000565486 219 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC008536.1-201ENST00000602872 669 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC010424.2-201ENST00000607594 443 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC026368.1-201ENST00000614934 690 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC048341.3-201ENST00000619323 491 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC127024.6-201ENST00000621598 424 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AC103798.2-201ENST00000624292 632 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AL356094.1-201ENST00000624663 1212 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AL356489.2-201ENST00000566968 3528 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 AL450326.2-201ENST00000421913 1962 ntBASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC28BQ9BUN5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RLIMP2-201ENST00000427891 1563 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RNU1-43P-201ENST00000365052 165 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 MIR708-201ENST00000390708 88 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AL589655.1-201ENST00000405398 482 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RN7SKP126-201ENST00000411143 300 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 TBCAP2-201ENST00000416175 326 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 OR2AM1P-201ENST00000422137 422 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RCC2P2-201ENST00000422174 918 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RPL7P57-201ENST00000423238 740 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 CR848007.2-201ENST00000424918 787 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 PTMAP3-201ENST00000447474 330 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RPL31P15-201ENST00000449770 338 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AL451050.1-201ENST00000450126 415 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AL049829.1-201ENST00000465411 156 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RPS26P39-201ENST00000469206 341 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RWDD4P1-201ENST00000488019 565 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RN7SL244P-201ENST00000493405 297 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 PFN1P8-201ENST00000497012 543 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 PGAM1P13-201ENST00000507497 754 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RNA5SP43-201ENST00000516559 110 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RNU6-467P-201ENST00000517027 110 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 OR7E10P-201ENST00000526420 991 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC005363.1-201ENST00000530779 351 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AL049779.2-201ENST00000553847 315 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC122134.1-201ENST00000565664 1104 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AC209154.1-201ENST00000582156 337 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms