Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ATG4AQ8WYN0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
ATG4AQ8WYN0 ZNF876P-202ENST00000398732 1485 ntBASIC5.46□□□□□ -1.53
ATG4AQ8WYN0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
ATG4AQ8WYN0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 RN7SKP153-201ENST00000365026 316 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 MT-TP-201ENST00000387461 68 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 DNAJC19P6-201ENST00000401853 280 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 SNORA11.3-201ENST00000408471 128 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 HMGB3P31-201ENST00000413333 595 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AL590806.1-201ENST00000415818 853 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 SETP9-201ENST00000423837 832 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 HSPE1P16-201ENST00000426640 348 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC064862.4-201ENST00000442180 334 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 HMGB3P6-201ENST00000444896 598 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 CALM1P2-201ENST00000452941 448 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC004815.1-201ENST00000484185 331 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC022133.1-201ENST00000490961 571 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC010486.2-201ENST00000505572 483 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 ENPP7P11-201ENST00000505915 627 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 Y_RNA.688-201ENST00000516565 95 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC022360.1-201ENST00000521058 340 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 BLZF2P-201ENST00000553776 1130 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC127024.5-201ENST00000580085 462 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 MIR4505-201ENST00000582238 73 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AL138478.1-201ENST00000612252 832 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 SNORA11.6-201ENST00000619030 128 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC004943.3-201ENST00000624116 600 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC024023.1-201ENST00000624530 922 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC017037.3-201ENST00000625016 472 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 MTND5P23-201ENST00000430812 1655 ntBASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
ATG4AQ8WYN0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC023490.2-201ENST00000359859 470 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 RNA5SP284-201ENST00000384547 118 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 SNORD65C-201ENST00000390962 71 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 PEX12P1-201ENST00000400284 1048 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 MTCO1P56-201ENST00000401674 224 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 FO393419.3-201ENST00000428741 282 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 TCEA1P3-201ENST00000443005 880 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 KATNBL1P3-201ENST00000443475 909 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 CYCSP51-201ENST00000443545 318 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC073109.1-201ENST00000445066 978 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC092685.1-201ENST00000447960 1243 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms