Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 MTND5P23-201ENST00000430812 1655 ntBASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 AC025574.1-201ENST00000554784 1653 ntBASIC5.15□□□□□ -1.59
COLGALT1Q8NBJ5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 RNU4-25P-201ENST00000410569 230 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 LINC00993-201ENST00000420453 540 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 AC073052.1-201ENST00000440417 714 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 AC073073.1-201ENST00000493920 463 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 AGGF1P9-201ENST00000561884 913 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 AC020910.2-201ENST00000603635 610 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 OR52H1-202ENST00000641796 1061 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 AC108751.5-201ENST00000492880 1336 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 SMG1P4-204ENST00000523028 4131 ntBASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COLGALT1Q8NBJ5 SMG1P6-201ENST00000532337 2930 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AL731532.2-201ENST00000623542 1953 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 OR56B2P-202ENST00000641377 2453 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC234779.1-201ENST00000425910 285 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AL356981.1-201ENST00000454879 684 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 HMGB3P14-201ENST00000494195 599 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 RNU1-6P-201ENST00000516290 144 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC026688.1-201ENST00000520639 1168 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AP000859.1-201ENST00000525536 307 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC116553.2-201ENST00000564203 463 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 MTCO1P8-201ENST00000416914 1523 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 AC008079.2-201ENST00000623543 20396 ntBASIC5.13□□□□□ -1.59
COLGALT1Q8NBJ5 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 RNU6-249P-201ENST00000363016 102 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 QRSL1P2-201ENST00000418582 964 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 UQCRBP1-201ENST00000421129 336 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC007064.3-201ENST00000422608 359 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 RPL12P34-201ENST00000424532 479 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms