Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC106730.2-201ENST00000566641 540 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 MIR1269B-201ENST00000580405 75 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AL162431.4-201ENST00000604674 411 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC055764.2-201ENST00000610089 670 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC245389.2-201ENST00000616023 576 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC242843.1-201ENST00000618702 573 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC006249.1-201ENST00000621223 471 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC091932.2-201ENST00000623014 291 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 CYP4F35P-202ENST00000636121 390 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 OR52B5P-202ENST00000641118 1110 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 PABPC1P6-201ENST00000445594 1829 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 ZNF90P1-201ENST00000480493 1951 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 OR9G4-201ENST00000302957 984 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RNU6-609P-201ENST00000365459 107 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RNU6-317P-201ENST00000384031 107 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RNU6-452P-201ENST00000384406 107 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 TAF9BP2-201ENST00000400856 499 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 SEC63P1-201ENST00000425785 1258 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AL163193.1-201ENST00000444895 788 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 HMGB3P21-201ENST00000452483 547 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC104634.1-201ENST00000452720 462 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC078857.1-201ENST00000469870 667 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RN7SL629P-201ENST00000489622 285 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RPL15P21-201ENST00000495592 567 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC010285.3-201ENST00000511668 676 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC012400.1-201ENST00000518452 381 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 IGLV2-28-201ENST00000520681 304 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 HMGB3P26-201ENST00000560051 582 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 CBX3P2-202ENST00000583365 535 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC095055.1-201ENST00000603472 1113 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC090527.3-201ENST00000619041 548 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 MIR6839-201ENST00000620425 113 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC097460.3-201ENST00000623099 442 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC015726.3-201ENST00000624501 418 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AC074029.4-201ENST00000624796 1859 ntBASIC4.86□□□□□ -1.63
NUP54Q7Z3B4 AL034549.2-201ENST00000618285 3373 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 RNU6-650P-201ENST00000365658 111 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 RNA5SP187-201ENST00000384400 119 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 PCNPP4-201ENST00000414817 517 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms