Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 RPL12P25-202ENST00000598100 674 ntBASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AC037198.3-201ENST00000616754 526 ntBASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AC118658.2-201ENST00000618697 459 ntBASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AP000648.2-201ENST00000624182 404 ntBASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 AC011008.2-201ENST00000624866 3352 ntBASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO4Q2I0M5 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL354854.1-201ENST00000455940 1363 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 OR9K1P-201ENST00000326513 941 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RNU6-702P-201ENST00000364982 107 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 Y_RNA.307-201ENST00000365022 117 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RNU5E-5P-201ENST00000365379 116 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RNU6-908P-201ENST00000410160 94 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL356968.2-201ENST00000412769 1257 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 MTCYBP8-201ENST00000422855 651 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RPS27AP14-201ENST00000422868 454 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL358934.1-201ENST00000432346 324 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RPS25P9-201ENST00000435591 252 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 HMGB1P45-201ENST00000435986 653 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RPL36AP39-201ENST00000445859 318 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC010587.1-201ENST00000505809 469 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AP003122.3-201ENST00000526316 255 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 OR8A2P-201ENST00000528631 952 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 OR4A1P-201ENST00000532342 920 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC006270.2-201ENST00000578523 652 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL162413.1-201ENST00000603198 110 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AP004372.1-201ENST00000604842 844 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AL035410.2-201ENST00000604963 864 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 RMST_3.1-201ENST00000611651 109 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC008250.2-201ENST00000615261 205 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 FAM27E2-201ENST00000619668 403 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC009268.2-201ENST00000621925 457 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO4Q2I0M5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms