Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNORD125-201ENST00000459538 96 ntBASIC5.62□□□□□ -1.51
COPAP53621 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 RPL7P39-201ENST00000481157 744 ntBASIC5.62□□□□□ -1.51
COPAP53621 RPS21P4-201ENST00000487122 248 ntBASIC5.62□□□□□ -1.51
COPAP53621 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.62□□□□□ -1.51
COPAP53621 AC026414.1-201ENST00000504046 698 ntBASIC5.62□□□□□ -1.51
COPAP53621 PRELID3BP5-201ENST00000508612 460 ntBASIC5.62□□□□□ -1.51
COPAP53621 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.62□□□□□ -1.51
COPAP53621 RNA5SP228-201ENST00000516232 133 ntBASIC5.62□□□□□ -1.51
COPAP53621 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 AP001207.2-201ENST00000519490 539 ntBASIC5.62□□□□□ -1.51
COPAP53621 OR5AK3P-201ENST00000527486 1297 ntBASIC5.62□□□□□ -1.51
COPAP53621 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.62□□□□□ -1.51
COPAP53621 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 AL049779.2-201ENST00000553847 315 ntBASIC5.62□□□□□ -1.51
COPAP53621 AC004825.1-201ENST00000555068 586 ntBASIC5.62□□□□□ -1.51
COPAP53621 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 AL160237.3-201ENST00000604114 1013 ntBASIC5.62□□□□□ -1.51
COPAP53621 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPAP53621 AP000484.1-201ENST00000620067 1252 ntBASIC5.62□□□□□ -1.51
COPAP53621 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 AL603750.1-201ENST00000624216 1717 ntBASIC5.62□□□□□ -1.51
COPAP53621 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPAP53621 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.61□□□□□ -1.51
COPAP53621 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.61□□□□□ -1.51
COPAP53621 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.61□□□□□ -1.51
COPAP53621 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COPAP53621 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 AC083843.2-201ENST00000568248 6253 ntBASIC5.61□□□□□ -1.51
COPAP53621 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.61□□□□□ -1.51
COPAP53621 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 SNORA74A-201ENST00000364089 198 ntBASIC5.61□□□□□ -1.51
COPAP53621 RN7SKP6-201ENST00000364795 319 ntBASIC5.61□□□□□ -1.51
COPAP53621 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.61□□□□□ -1.51
COPAP53621 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
COPAP53621 MIR223-201ENST00000385204 110 ntBASIC5.61□□□□□ -1.51
COPAP53621 AC005042.1-201ENST00000393397 800 ntBASIC5.61□□□□□ -1.51
COPAP53621 RPL7P27-201ENST00000403775 720 ntBASIC5.61□□□□□ -1.51
COPAP53621 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 MTATP6P20-201ENST00000414147 562 ntBASIC5.61□□□□□ -1.51
COPAP53621 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 RNF10P1-201ENST00000418589 369 ntBASIC5.61□□□□□ -1.51
COPAP53621 OSTCP5-201ENST00000425293 453 ntBASIC5.61□□□□□ -1.51
COPAP53621 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.61□□□□□ -1.51
COPAP53621 MTND2P5-201ENST00000432656 1006 ntBASIC5.61□□□□□ -1.51
COPAP53621 GAPDHP58-201ENST00000438477 1006 ntBASIC5.61□□□□□ -1.51
COPAP53621 AL358794.1-201ENST00000445689 381 ntBASIC5.61□□□□□ -1.51
COPAP53621 TRY2P-201ENST00000448860 689 ntBASIC5.61□□□□□ -1.51
COPAP53621 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.61□□□□□ -1.51
COPAP53621 MEMO1P4-201ENST00000453590 386 ntBASIC5.61□□□□□ -1.51
COPAP53621 AC079841.1-201ENST00000481228 950 ntBASIC5.61□□□□□ -1.51
COPAP53621 RPS7P6-201ENST00000485777 579 ntBASIC5.61□□□□□ -1.51
COPAP53621 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 AC005412.2-201ENST00000492004 341 ntBASIC5.61□□□□□ -1.51
COPAP53621 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.61□□□□□ -1.51
COPAP53621 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.61□□□□□ -1.51
COPAP53621 HAUS8P1-201ENST00000549005 542 ntBASIC5.61□□□□□ -1.51
COPAP53621 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.61□□□□□ -1.51
COPAP53621 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 MIR4660-201ENST00000583549 74 ntBASIC5.61□□□□□ -1.51
COPAP53621 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.61□□□□□ -1.51
COPAP53621 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.61□□□□□ -1.51
COPAP53621 OR2BH1P-201ENST00000608850 864 ntBASIC5.61□□□□□ -1.51
COPAP53621 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.61□□□□□ -1.51
COPAP53621 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
COPAP53621 AC048344.4-201ENST00000619744 527 ntBASIC5.61□□□□□ -1.51
COPAP53621 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
COPAP53621 AC083899.1-201ENST00000454465 3819 ntBASIC5.61□□□□□ -1.51
COPAP53621 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPAP53621 SMG1P6-201ENST00000532337 2930 ntBASIC5.61□□□□□ -1.51
COPAP53621 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms