Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCNKAP51800 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 MIR4646-201ENST00000580775 63 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC068620.3-201ENST00000602749 560 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 AC096947.1-201ENST00000603233 470 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.05□□□□□ -1.6
CLCNKAP51800 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCNKAP51800 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCNKAP51800 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CLCNKAP51800 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLCNKAP51800 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCNKAP51800 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLCNKAP51800 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 AC132825.1-201ENST00000463573 2247 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLCNKAP51800 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCNKAP51800 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLCNKAP51800 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCNKAP51800 RNU6-1000P-201ENST00000391066 106 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLCNKAP51800 VDAC2P1-201ENST00000399358 958 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 MTATP6P31-201ENST00000406985 692 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 RN7SKP114-201ENST00000410327 279 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AL024507.1-201ENST00000412741 274 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 MTCYBP7-201ENST00000419540 1134 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 NPM1P22-201ENST00000427761 952 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 MTCYBP32-201ENST00000427945 1084 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCNKAP51800 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCNKAP51800 MTCYBP21-201ENST00000443300 1113 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AL353898.1-201ENST00000444055 238 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCNKAP51800 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCNKAP51800 RN7SL610P-201ENST00000463845 291 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.04□□□□□ -1.6
CLCNKAP51800 AC020779.1-201ENST00000478757 796 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 RN7SL809P-201ENST00000482040 297 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCNKAP51800 AC098976.1-201ENST00000513014 541 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC004980.4-201ENST00000513375 203 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 HAUS1P3-201ENST00000523909 662 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCNKAP51800 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLCNKAP51800 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.04□□□□□ -1.6
CLCNKAP51800 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLCNKAP51800 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLCNKAP51800 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.04□□□□□ -1.6
CLCNKAP51800 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCNKAP51800 AF230666.2-201ENST00000602328 725 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 MTCO2P22-201ENST00000603246 681 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC073137.1-201ENST00000605636 634 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AP005432.2-201ENST00000608162 586 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 BNIP3P41-202ENST00000616656 861 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCNKAP51800 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC105105.5-201ENST00000622635 1294 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 AC004808.1-201ENST00000627671 721 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CLCNKAP51800 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.04□□□□□ -1.6
CLCNKAP51800 CASC19-281ENST00000642118 1554 ntBASIC5.04□□□□□ -1.6
CLCNKAP51800 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCNKAP51800 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC005332.5-201ENST00000591222 2919 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLCNKAP51800 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLCNKAP51800 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLCNKAP51800 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CLCNKAP51800 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC011755.1-201ENST00000623763 2049 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 RAD1P1-201ENST00000231383 813 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 RN7SKP113-201ENST00000363891 295 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 RNU4-4P-201ENST00000364588 130 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms