Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC012414.7-202ENST00000622705 1090 ntBASIC6.87□□□□□ -1.31
USP11P51784 AC109454.4-201ENST00000623411 649 ntBASIC6.87□□□□□ -1.31
USP11P51784 AP000550.3-201ENST00000637734 379 ntBASIC6.87□□□□□ -1.31
USP11P51784 AC073869.7-201ENST00000640874 297 ntBASIC6.87□□□□□ -1.31
USP11P51784 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USP11P51784 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USP11P51784 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USP11P51784 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.87□□□□□ -1.31
USP11P51784 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USP11P51784 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USP11P51784 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
USP11P51784 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.87□□□□□ -1.31
USP11P51784 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.87□□□□□ -1.31
USP11P51784 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
USP11P51784 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 ZNF680P1-201ENST00000436625 1469 ntBASIC6.86□□□□□ -1.31
USP11P51784 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 KYNUP3-201ENST00000574386 1341 ntBASIC6.86□□□□□ -1.31
USP11P51784 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 AC008033.1-201ENST00000216407 1162 ntBASIC6.86□□□□□ -1.31
USP11P51784 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 RNU6-181P-201ENST00000363225 107 ntBASIC6.86□□□□□ -1.31
USP11P51784 Y_RNA.256-201ENST00000364594 104 ntBASIC6.86□□□□□ -1.31
USP11P51784 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 RNU6-1042P-201ENST00000384204 107 ntBASIC6.86□□□□□ -1.31
USP11P51784 SNORA70.9-201ENST00000384370 135 ntBASIC6.86□□□□□ -1.31
USP11P51784 RNU6-348P-201ENST00000384386 107 ntBASIC6.86□□□□□ -1.31
USP11P51784 SNORD115-47-201ENST00000391226 86 ntBASIC6.86□□□□□ -1.31
USP11P51784 AC004386.1-201ENST00000393214 761 ntBASIC6.86□□□□□ -1.31
USP11P51784 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 AL035419.1-201ENST00000397037 564 ntBASIC6.86□□□□□ -1.31
USP11P51784 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 AL356968.2-201ENST00000412769 1257 ntBASIC6.86□□□□□ -1.31
USP11P51784 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.86□□□□□ -1.31
USP11P51784 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.86□□□□□ -1.31
USP11P51784 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 RPL12P11-201ENST00000439970 501 ntBASIC6.86□□□□□ -1.31
USP11P51784 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.86□□□□□ -1.31
USP11P51784 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.86□□□□□ -1.31
USP11P51784 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 AL035690.1-201ENST00000490892 383 ntBASIC6.86□□□□□ -1.31
USP11P51784 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 CCDC11P1-201ENST00000503137 1162 ntBASIC6.86□□□□□ -1.31
USP11P51784 MTCO2P30-201ENST00000503662 364 ntBASIC6.86□□□□□ -1.31
USP11P51784 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.86□□□□□ -1.31
USP11P51784 AC025465.4-201ENST00000513422 638 ntBASIC6.86□□□□□ -1.31
USP11P51784 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 AP003396.4-201ENST00000527574 265 ntBASIC6.86□□□□□ -1.31
USP11P51784 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.86□□□□□ -1.31
USP11P51784 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 AC079905.1-201ENST00000549280 475 ntBASIC6.86□□□□□ -1.31
USP11P51784 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 MTCO1P40-201ENST00000574371 625 ntBASIC6.86□□□□□ -1.31
USP11P51784 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 AC004890.3-201ENST00000605566 1095 ntBASIC6.86□□□□□ -1.31
USP11P51784 AC004948.1-201ENST00000609858 672 ntBASIC6.86□□□□□ -1.31
USP11P51784 AL589743.7-201ENST00000612637 233 ntBASIC6.86□□□□□ -1.31
USP11P51784 AC010133.1-201ENST00000615809 842 ntBASIC6.86□□□□□ -1.31
USP11P51784 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.86□□□□□ -1.31
USP11P51784 AL136228.1-201ENST00000622221 319 ntBASIC6.86□□□□□ -1.31
USP11P51784 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.86□□□□□ -1.31
USP11P51784 AC005261.2-201ENST00000593427 4258 ntBASIC6.86□□□□□ -1.31
USP11P51784 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 MRRFP1-201ENST00000435941 1675 ntBASIC6.86□□□□□ -1.31
USP11P51784 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USP11P51784 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
USP11P51784 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 PSG10P-201ENST00000501199 1500 ntBASIC6.86□□□□□ -1.31
USP11P51784 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
USP11P51784 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USP11P51784 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
USP11P51784 AC140479.2-201ENST00000421567 3130 ntBASIC6.85□□□□□ -1.31
USP11P51784 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.85□□□□□ -1.31
USP11P51784 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 NEPNP-201ENST00000404786 1371 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms