Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC233702.9-201ENST00000581528 203 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AC095055.1-201ENST00000603472 1113 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC133552.5-201ENST00000604266 540 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC104687.2-201ENST00000604442 342 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 KATNBL1P1-201ENST00000605192 748 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC079395.2-201ENST00000610982 737 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 MIR7973-1-201ENST00000614683 76 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA1P35221 MIR6837-201ENST00000620884 64 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA1P35221 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA1P35221 CASC19-264ENST00000641912 1184 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CTNNA1P35221 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA1P35221 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 CASC19-204ENST00000641001 2055 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTNNA1P35221 RNA5SP242-201ENST00000364171 118 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 MIR143-201ENST00000385300 106 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 RPL31P52-201ENST00000407532 367 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AL513325.1-201ENST00000417716 1034 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 SLC35E1P1-201ENST00000419313 864 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.23□□□□□ -1.57
CTNNA1P35221 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AL031663.1-201ENST00000437445 219 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AC073052.1-201ENST00000440417 714 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 HMGB3P9-201ENST00000441799 583 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.23□□□□□ -1.57
CTNNA1P35221 KNOP1P3-201ENST00000446933 426 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.23□□□□□ -1.57
CTNNA1P35221 AC011225.1-201ENST00000457751 369 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AC020890.1-201ENST00000491837 504 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 OR9N1P-202ENST00000494289 481 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AC010350.1-201ENST00000504908 231 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 RNA5SP464-201ENST00000516251 108 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AF186190.1-201ENST00000517470 480 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 NOP56P3-201ENST00000549457 385 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AL049779.2-201ENST00000553847 315 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTNNA1P35221 CYCSP40-201ENST00000575927 294 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA1P35221 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA1P35221 FKBP1AP1-201ENST00000594588 318 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 RNF138P2-201ENST00000603490 592 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 AC243654.2-201ENST00000612843 443 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTNNA1P35221 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.23□□□□□ -1.57
CTNNA1P35221 NEAT1-202ENST00000501122 22743 ntBASIC5.23□□□□□ -1.57
CTNNA1P35221 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.23□□□□□ -1.57
CTNNA1P35221 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CTNNA1P35221 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA1P35221 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA1P35221 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
CTNNA1P35221 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.22□□□□□ -1.57
CTNNA1P35221 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CTNNA1P35221 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.22□□□□□ -1.57
CTNNA1P35221 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.22□□□□□ -1.57
CTNNA1P35221 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 OR5T3-201ENST00000303059 1023 ntBASIC5.22□□□□□ -1.57
CTNNA1P35221 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CTNNA1P35221 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.22□□□□□ -1.57
CTNNA1P35221 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA1P35221 DUTP5-201ENST00000406790 469 ntBASIC5.22□□□□□ -1.57
CTNNA1P35221 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CTNNA1P35221 RN7SKP59-201ENST00000410520 314 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms