Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.95□□□□□ -1.62
RETP07949 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
RETP07949 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.95□□□□□ -1.62
RETP07949 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.95□□□□□ -1.62
RETP07949 AL137100.1-201ENST00000556703 1620 ntBASIC4.95□□□□□ -1.62
RETP07949 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RETP07949 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 RNA5SP515-201ENST00000364570 118 ntBASIC4.95□□□□□ -1.62
RETP07949 RNA5SP223-201ENST00000365174 120 ntBASIC4.95□□□□□ -1.62
RETP07949 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 AC007068.1-201ENST00000396690 844 ntBASIC4.95□□□□□ -1.62
RETP07949 AL358176.3-201ENST00000420757 454 ntBASIC4.95□□□□□ -1.62
RETP07949 AC006065.1-201ENST00000422539 802 ntBASIC4.95□□□□□ -1.62
RETP07949 RPL12P34-201ENST00000424532 479 ntBASIC4.95□□□□□ -1.62
RETP07949 AC023141.6-201ENST00000429418 337 ntBASIC4.95□□□□□ -1.62
RETP07949 RPL35AP21-201ENST00000437667 333 ntBASIC4.95□□□□□ -1.62
RETP07949 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.95□□□□□ -1.62
RETP07949 ARL2BPP10-201ENST00000446487 531 ntBASIC4.95□□□□□ -1.62
RETP07949 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.95□□□□□ -1.62
RETP07949 MTND2P28-201ENST00000457540 1044 ntBASIC4.95□□□□□ -1.62
RETP07949 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.95□□□□□ -1.62
RETP07949 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.95□□□□□ -1.62
RETP07949 AC010618.1-201ENST00000469924 477 ntBASIC4.95□□□□□ -1.62
RETP07949 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
RETP07949 AF186190.1-201ENST00000517470 480 ntBASIC4.95□□□□□ -1.62
RETP07949 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.95□□□□□ -1.62
RETP07949 AC084824.1-201ENST00000550917 1005 ntBASIC4.95□□□□□ -1.62
RETP07949 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.95□□□□□ -1.62
RETP07949 AC005191.1-201ENST00000603950 358 ntBASIC4.95□□□□□ -1.62
RETP07949 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.95□□□□□ -1.62
RETP07949 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.95□□□□□ -1.62
RETP07949 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.95□□□□□ -1.62
RETP07949 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.95□□□□□ -1.62
RETP07949 AL161637.1-201ENST00000622380 412 ntBASIC4.95□□□□□ -1.62
RETP07949 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RETP07949 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RETP07949 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RETP07949 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.95□□□□□ -1.62
RETP07949 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.95□□□□□ -1.62
RETP07949 AL450345.1-202ENST00000605741 3881 ntBASIC4.95□□□□□ -1.62
RETP07949 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 AL731566.1-201ENST00000620490 1937 ntBASIC4.95□□□□□ -1.62
RETP07949 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.95□□□□□ -1.62
RETP07949 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 ZNF652P1-201ENST00000442420 1309 ntBASIC4.95□□□□□ -1.62
RETP07949 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RETP07949 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RETP07949 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RETP07949 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 OR51H2P-202ENST00000641424 3046 ntBASIC4.94□□□□□ -1.62
RETP07949 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.94□□□□□ -1.62
RETP07949 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RETP07949 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.94□□□□□ -1.62
RETP07949 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.94□□□□□ -1.62
RETP07949 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RETP07949 AL022393.1-201ENST00000625142 1677 ntBASIC4.94□□□□□ -1.62
RETP07949 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 RNA5SP447-201ENST00000363749 119 ntBASIC4.94□□□□□ -1.62
RETP07949 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RETP07949 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RETP07949 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.94□□□□□ -1.62
RETP07949 BTF3P6-201ENST00000448054 499 ntBASIC4.94□□□□□ -1.62
RETP07949 TCEA1P1-201ENST00000449716 880 ntBASIC4.94□□□□□ -1.62
RETP07949 CEACAMP6-201ENST00000452007 574 ntBASIC4.94□□□□□ -1.62
RETP07949 PPM1AP1-201ENST00000502740 1135 ntBASIC4.94□□□□□ -1.62
RETP07949 RNA5SP360-201ENST00000516555 118 ntBASIC4.94□□□□□ -1.62
RETP07949 AC012339.2-201ENST00000523996 453 ntBASIC4.94□□□□□ -1.62
RETP07949 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.94□□□□□ -1.62
RETP07949 AC138701.1-201ENST00000524329 714 ntBASIC4.94□□□□□ -1.62
RETP07949 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.94□□□□□ -1.62
RETP07949 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.94□□□□□ -1.62
RETP07949 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.94□□□□□ -1.62
RETP07949 KPNA2P3-201ENST00000584190 848 ntBASIC4.94□□□□□ -1.62
RETP07949 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.94□□□□□ -1.62
RETP07949 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.94□□□□□ -1.62
RETP07949 AC093227.2-201ENST00000589357 285 ntBASIC4.94□□□□□ -1.62
RETP07949 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.94□□□□□ -1.62
RETP07949 MIR92B-201ENST00000607575 96 ntBASIC4.94□□□□□ -1.62
RETP07949 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.94□□□□□ -1.62
RETP07949 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RETP07949 AC010928.1-201ENST00000592477 1447 ntBASIC4.94□□□□□ -1.62
RETP07949 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.94□□□□□ -1.62
RETP07949 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.94□□□□□ -1.62
RETP07949 AC107027.3-201ENST00000565095 3473 ntBASIC4.93□□□□□ -1.62
RETP07949 AC015813.6-201ENST00000624409 5808 ntBASIC4.93□□□□□ -1.62
RETP07949 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RETP07949 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RETP07949 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RETP07949 AL672167.1-204ENST00000641875 3017 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms