Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNORD95-201ENST00000579879 68 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 SNORA74C-1-201ENST00000580726 201 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQA1P01909 SNX6P1-201ENST00000601728 1224 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AL589674.2-201ENST00000604304 337 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AC020634.1-201ENST00000608701 549 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AC000068.2-201ENST00000608816 460 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AL353726.1-201ENST00000614041 1000 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 RPSAP73-201ENST00000614820 330 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AL359757.1-201ENST00000623176 255 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQA1P01909 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DQA1P01909 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQA1P01909 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.59□□□□□ -1.83
HLA-DQA1P01909 AL121950.1-201ENST00000624993 2077 ntBASIC3.59□□□□□ -1.83
HLA-DQA1P01909 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DQA1P01909 VN2R3P-201ENST00000422626 1412 ntBASIC3.59□□□□□ -1.84
HLA-DQA1P01909 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DQA1P01909 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.59□□□□□ -1.84
HLA-DQA1P01909 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
HLA-DQA1P01909 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.59□□□□□ -1.84
HLA-DQA1P01909 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DQA1P01909 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC011266.1-201ENST00000624119 3569 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 RNU1-43P-201ENST00000365052 165 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 RNA5SP22-201ENST00000365393 109 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 RNU1-149P-201ENST00000390870 161 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 ATP5HP3-201ENST00000396994 486 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 GLUD1P9-201ENST00000420997 1173 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AL451139.1-201ENST00000434718 346 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AL391987.1-201ENST00000441025 200 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 HMGB3P9-201ENST00000441799 583 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 TXNP2-201ENST00000443918 295 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AP000281.1-201ENST00000444036 316 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 PTMAP3-201ENST00000447474 330 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 NPM1P39-201ENST00000449818 867 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC069277.2-201ENST00000454211 432 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC023141.9-201ENST00000458734 412 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC015795.1-201ENST00000513669 327 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC117525.1-201ENST00000515228 503 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 IGHV3-63-201ENST00000518422 341 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC109635.6-201ENST00000525487 1113 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC015912.2-201ENST00000571053 181 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 MTATP6P25-201ENST00000574491 261 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 MIR4310-201ENST00000582950 57 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 SUGT1P3-202ENST00000604259 383 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC008966.2-201ENST00000606157 453 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AL356274.1-201ENST00000617064 410 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 MIR4727-201ENST00000622232 55 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC011815.3-201ENST00000624194 473 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 HSPA8P17-201ENST00000427029 1382 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 AL133243.3-201ENST00000617415 3004 ntBASIC3.58□□□□□ -1.84
HLA-DQA1P01909 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1P01909 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 RN7SKP293-201ENST00000411389 296 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 UBTFL3-201ENST00000418934 1024 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 LINC00993-201ENST00000420453 540 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC093084.1-201ENST00000424233 687 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 CENPIP1-201ENST00000425713 902 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms