Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4BO75351 AL162574.1-201ENST00000615702 950 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4BO75351 AC015660.5-201ENST00000623238 564 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AC104454.1-201ENST00000421341 1401 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 AC111188.2-201ENST00000529697 1387 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS4BO75351 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS4BO75351 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS4BO75351 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 RNU6-543P-201ENST00000362576 108 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 RN7SKP162-201ENST00000363605 345 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 OR7E101P-201ENST00000400428 513 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 SKINT1L-201ENST00000401057 817 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 ERHP2-201ENST00000402323 299 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 GPS2P1-201ENST00000411761 986 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 TCEA1P4-201ENST00000415066 844 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 MFSD13B-201ENST00000420133 1290 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 VN1R108P-201ENST00000431580 830 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 KATNBL1P3-201ENST00000443475 909 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 SPRYD7P1-201ENST00000443861 570 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 EXTL2P1-201ENST00000446218 416 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 ART2BP-201ENST00000453501 499 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 RNU7-140P-201ENST00000459546 60 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 RN7SL188P-201ENST00000469842 285 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 DUTP1-201ENST00000493631 470 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 RNU5A-4P-201ENST00000516588 111 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AC109635.6-201ENST00000525487 1113 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC027026.1-201ENST00000532323 742 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AL356057.1-201ENST00000533798 831 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC122688.1-201ENST00000541494 223 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 AGGF1P7-201ENST00000562369 913 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 ATP5F1P7-201ENST00000567330 760 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4BO75351 AL445423.1-201ENST00000609941 536 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AC011472.4-201ENST00000615848 491 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC139792.2-201ENST00000624218 587 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 AC119674.1-212ENST00000641155 993 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4BO75351 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VPS4BO75351 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4BO75351 AC073055.1-201ENST00000456901 1621 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms