Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 FTH1P9-201ENST00000513251 355 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 RNU6-764P-201ENST00000516396 105 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 AP002404.1-201ENST00000532005 451 ntBASIC7.87□□□□□ -1.15
RNF40O75150 SSU72P6-201ENST00000532644 488 ntBASIC7.87□□□□□ -1.15
RNF40O75150 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 AL389895.1-201ENST00000554127 252 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AL121579.2-201ENST00000555466 590 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 AC007136.1-201ENST00000589141 199 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 AL589765.5-201ENST00000596133 515 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AC020765.1-201ENST00000604296 328 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.87□□□□□ -1.15
RNF40O75150 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AL133173.2-201ENST00000614270 90 ntBASIC7.87□□□□□ -1.15
RNF40O75150 FAM157A-202ENST00000615155 405 ntBASIC7.87□□□□□ -1.15
RNF40O75150 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.87□□□□□ -1.15
RNF40O75150 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 FKBP1AP4-201ENST00000631775 336 ntBASIC7.87□□□□□ -1.15
RNF40O75150 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 GTF2H2B-203ENST00000508065 1432 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF40O75150 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.86□□□□□ -1.15
RNF40O75150 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF40O75150 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.86□□□□□ -1.15
RNF40O75150 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF40O75150 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RNF40O75150 RNU5E-8P-201ENST00000363502 116 ntBASIC7.86□□□□□ -1.15
RNF40O75150 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RNF40O75150 RNU6ATAC23P-201ENST00000408448 123 ntBASIC7.86□□□□□ -1.15
RNF40O75150 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
RNF40O75150 OFD1P1Y-201ENST00000411756 1225 ntBASIC7.86□□□□□ -1.15
RNF40O75150 YWHAZP3-201ENST00000415292 738 ntBASIC7.86□□□□□ -1.15
RNF40O75150 RPL36P18-201ENST00000419316 318 ntBASIC7.86□□□□□ -1.15
RNF40O75150 PGAM1P3-201ENST00000420790 565 ntBASIC7.86□□□□□ -1.15
RNF40O75150 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.86□□□□□ -1.15
RNF40O75150 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF40O75150 SNX18P14-201ENST00000429308 574 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC105052.2-201ENST00000434317 794 ntBASIC7.86□□□□□ -1.15
RNF40O75150 RPSAP40-201ENST00000442343 891 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AL137074.1-201ENST00000442640 465 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC008620.1-201ENST00000468453 592 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC013356.1-201ENST00000489027 564 ntBASIC7.86□□□□□ -1.15
RNF40O75150 RN7SL516P-201ENST00000496127 297 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC055733.3-201ENST00000505214 523 ntBASIC7.86□□□□□ -1.15
RNF40O75150 LINC01085-203ENST00000511195 326 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC027309.2-201ENST00000520566 192 ntBASIC7.86□□□□□ -1.15
RNF40O75150 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 AP003072.2-201ENST00000527756 676 ntBASIC7.86□□□□□ -1.15
RNF40O75150 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.86□□□□□ -1.15
RNF40O75150 APOOP3-201ENST00000536787 586 ntBASIC7.86□□□□□ -1.15
RNF40O75150 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF40O75150 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
RNF40O75150 AC024614.1-201ENST00000577546 307 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC073539.2-201ENST00000597113 165 ntBASIC7.86□□□□□ -1.15
RNF40O75150 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.86□□□□□ -1.15
RNF40O75150 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.86□□□□□ -1.15
RNF40O75150 AL157817.1-201ENST00000614264 790 ntBASIC7.86□□□□□ -1.15
RNF40O75150 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.86□□□□□ -1.15
RNF40O75150 pRNA.9-201ENST00000618609 89 ntBASIC7.86□□□□□ -1.15
RNF40O75150 AC137590.2-201ENST00000619709 240 ntBASIC7.86□□□□□ -1.15
RNF40O75150 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.86□□□□□ -1.15
RNF40O75150 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.86□□□□□ -1.15
RNF40O75150 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
RNF40O75150 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RNF40O75150 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF40O75150 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 AC011493.1-201ENST00000596753 1632 ntBASIC7.85□□□□□ -1.15
RNF40O75150 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms