Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC073348.1-201ENST00000623002 331 ntBASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 AC019278.1-201ENST00000623516 479 ntBASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 AP000648.2-201ENST00000624182 404 ntBASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 AC073488.9-201ENST00000631601 754 ntBASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZC3H4Q9UPT8 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC068733.2-201ENST00000605434 1418 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AL356776.1-201ENST00000406574 447 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 SDHDP6-201ENST00000414693 480 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AL590806.1-201ENST00000415818 853 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 SDCBPP3-201ENST00000419629 891 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC239367.3-201ENST00000428996 814 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 MTCYBP45-201ENST00000435243 565 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC015983.1-201ENST00000441577 373 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC104306.1-201ENST00000449702 371 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AL606490.1-201ENST00000452266 765 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC098847.1-201ENST00000473094 348 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 HMGN2P25-201ENST00000486956 268 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC108078.1-201ENST00000508073 725 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC083906.1-201ENST00000509298 406 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 RNU6-416P-201ENST00000516265 103 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC087276.1-201ENST00000529659 480 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 DUX4L52-201ENST00000549363 777 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC068305.2-201ENST00000550567 1205 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 RN7SL208P-201ENST00000577964 296 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 U6.107-201ENST00000637108 79 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 DCAF13P1-201ENST00000495256 1330 ntBASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.93□□□□□ -1.14
ZC3H4Q9UPT8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL161901.1-201ENST00000624954 3425 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 RNU6-877P-201ENST00000383868 107 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 Y_RNA.548-201ENST00000384656 105 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL590762.1-201ENST00000391782 432 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 RPL5P20-201ENST00000403848 896 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL590004.1-201ENST00000405321 300 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 RPL23AP47-201ENST00000408017 460 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 MTCO1P20-201ENST00000425366 358 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC093716.1-201ENST00000435923 377 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 TUBB4BP6-201ENST00000437576 479 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 DNAJB5P1-201ENST00000454004 806 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 ACA64.1-201ENST00000459171 127 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 OR52A4P-201ENST00000472867 958 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC063943.2-201ENST00000495697 534 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC019235.1-201ENST00000503847 207 ntBASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC7.92□□□□□ -1.14
ZC3H4Q9UPT8 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms