Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC009166.2-201ENST00000624410 2833 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 RNA5SP442-201ENST00000365050 107 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 RNA5SP355-201ENST00000365317 135 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 RN7SKP47-201ENST00000365347 328 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 ATP5HP3-201ENST00000396994 486 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AL589647.1-201ENST00000402485 466 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 MRPL42P2-201ENST00000403169 426 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 RPL37P10-201ENST00000412884 288 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC244452.1-201ENST00000413798 141 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC127526.1-201ENST00000417526 366 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC009362.1-201ENST00000427253 406 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 OR2AS1P-201ENST00000427827 319 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 RBMY2QP-201ENST00000429799 1147 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AL645936.2-201ENST00000430565 928 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 CEP57L1P1-201ENST00000430943 1201 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AL604028.2-201ENST00000437848 788 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AL136380.1-201ENST00000447970 162 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 PRDX1P1-201ENST00000449329 596 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC090638.1-201ENST00000498296 909 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 SCARNA6-201ENST00000515982 265 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 Y_RNA.682-201ENST00000516457 100 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 DEFB131D-201ENST00000526803 184 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 SLC2A13P1-201ENST00000531560 322 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 TPMTP1-201ENST00000592307 737 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC008626.2-201ENST00000624425 248 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 PNPT1P2-201ENST00000456768 2050 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 CDC27P3-201ENST00000635418 1910 ntBASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM35Q9UPQ4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL096816.1-201ENST00000623300 2920 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL031595.3-201ENST00000624919 14262 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-200P-201ENST00000364743 107 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 PDCL3P5-201ENST00000398028 722 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 SUMO2P13-201ENST00000403109 272 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 RN7SKP158-201ENST00000410453 326 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-77P-201ENST00000410554 91 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 HMGB1P9-201ENST00000429856 646 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 ERLEC1P1-201ENST00000433806 578 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AC002553.2-201ENST00000453217 340 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AC010307.1-201ENST00000467206 836 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL591122.1-201ENST00000487348 492 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AP003181.2-201ENST00000528941 181 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AP002373.2-201ENST00000541631 1060 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 MIR3135A-201ENST00000578460 77 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 MIR5010-201ENST00000582846 120 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms