Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AL354798.1-201ENST00000622505 329 ntBASIC1.84□□□□□ -2.12
MACF1Q9UPN3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 RN7SKP153-201ENST00000365026 316 ntBASIC1.84□□□□□ -2.12
MACF1Q9UPN3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.84□□□□□ -2.12
MACF1Q9UPN3 RNU4-6P-201ENST00000410804 122 ntBASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 RPL35P6-201ENST00000490024 372 ntBASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AC027667.1-201ENST00000545814 304 ntBASIC1.84□□□□□ -2.12
MACF1Q9UPN3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AL451007.1-201ENST00000595491 289 ntBASIC1.84□□□□□ -2.12
MACF1Q9UPN3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AL139413.1-201ENST00000421309 217 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 U3.45-201ENST00000607547 219 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AL133383.2-201ENST00000622958 2336 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 YWHAEP4-201ENST00000505390 198 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AP001804.2-201ENST00000533932 910 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RN7SL600P-201ENST00000581811 299 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AL353743.1-202ENST00000431724 1695 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TTC3P1-201ENST00000399586 6081 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AMMECR1LP1-201ENST00000415152 841 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC107871.2-201ENST00000612894 502 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC006453.5-201ENST00000636451 619 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RPL21P75-201ENST00000396599 483 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RPL21P1-201ENST00000399532 476 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RPL21P28-201ENST00000401418 483 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms