Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 Y_RNA.128-201ENST00000363391 112 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RNU6-1097P-201ENST00000363586 107 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RNU6-108P-201ENST00000365558 107 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 SNORA20.2-201ENST00000383922 131 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RNU6-444P-201ENST00000383988 108 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RNU6-729P-201ENST00000384399 107 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 SNORD94-201ENST00000386037 137 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RNU6-1158P-201ENST00000391167 107 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 MIR548P-201ENST00000408336 84 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AP000534.2-201ENST00000412729 568 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC004987.3-201ENST00000413879 771 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 SALL1P1-201ENST00000438101 3837 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AL354714.5-201ENST00000450131 590 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AL445991.1-201ENST00000450381 475 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 Y_RNA.632-201ENST00000459189 102 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC026410.2-201ENST00000460281 156 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RPL31P50-201ENST00000471002 296 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC005017.1-201ENST00000482002 490 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RN7SL306P-201ENST00000492941 296 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RN7SL143P-201ENST00000496780 297 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RPL38P4-201ENST00000502376 214 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC114324.2-202ENST00000503812 134 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 DCAF13P2-201ENST00000514188 555 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RNU6-1170P-201ENST00000515974 106 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 IGLV1-62-201ENST00000518003 441 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC023050.3-201ENST00000541142 333 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 UBE2CP1-201ENST00000557130 554 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 SNX29P2-204ENST00000603801 875 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC007255.2-201ENST00000604053 631 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC093388.1-201ENST00000609166 430 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC233309.1-201ENST00000619522 751 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC068831.8-201ENST00000620171 435 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AL118496.1-201ENST00000440201 1812 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 AC015871.3-201ENST00000618835 2261 ntBASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.52□□□□□ -1.21
LIMD1Q9UGP4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 AL592429.1-201ENST00000403909 1473 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 AC123769.2-201ENST00000624332 5984 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 MTND5P3-201ENST00000438536 1800 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 AP002364.1-201ENST00000623330 3386 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 RNU5E-1-201ENST00000362477 120 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 RNY1P12-201ENST00000364251 105 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 Y_RNA.381-201ENST00000365666 102 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 MIR323B-201ENST00000385269 82 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 U3.23-201ENST00000391132 200 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 AC068050.1-201ENST00000394891 380 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 AC234782.4-201ENST00000417646 1048 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 GAPDHP57-201ENST00000424400 585 ntBASIC7.51□□□□□ -1.21
LIMD1Q9UGP4 RBMY2QP-201ENST00000429799 1147 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms