Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL591623.2-201ENST00000449978 222 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 TPT1P1-201ENST00000458495 518 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC021087.2-201ENST00000504656 1203 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 NAMPTP2-201ENST00000505629 1115 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC093770.1-201ENST00000511559 571 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC138938.1-201ENST00000515431 782 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 RPS27AP18-201ENST00000515536 459 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC093014.1-201ENST00000548926 724 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC018552.1-201ENST00000562099 811 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 MIR3691-201ENST00000578066 90 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL158050.2-201ENST00000605336 568 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC034229.4-201ENST00000607861 441 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL139407.1-201ENST00000613826 1175 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC015871.5-202ENST00000623252 701 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL359643.1-201ENST00000404109 423 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 MIR1271-201ENST00000408537 86 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 QRSL1P2-201ENST00000418582 964 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 ARL2BPP3-201ENST00000421226 480 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 DDX39BP1-205ENST00000422507 192 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL606490.7-201ENST00000433136 191 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 KNOP1P3-201ENST00000446933 426 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL031584.1-201ENST00000447169 754 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL354714.3-201ENST00000447284 493 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL157884.3-201ENST00000448273 1184 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL591363.1-201ENST00000450091 483 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC110749.1-201ENST00000462007 357 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL591473.1-201ENST00000464297 313 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 BX284632.1-201ENST00000478218 541 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC020890.1-201ENST00000491837 504 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 RN7SKP260-201ENST00000516907 149 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC138701.1-201ENST00000524329 714 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC092490.3-201ENST00000545370 572 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 CYCSP40-201ENST00000575927 294 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC006116.3-201ENST00000592968 361 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC133794.1-201ENST00000602731 914 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC104687.2-201ENST00000604442 342 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AC004775.1-201ENST00000607389 753 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 RMST_5.1-201ENST00000618704 126 ntBASIC5.14□□□□□ -1.59
PCDH9Q9HC56 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
PCDH9Q9HC56 AL356317.1-201ENST00000396110 1436 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms