Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC093311.1-201ENST00000506586 2021 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 AL132640.2-201ENST00000559968 1698 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 HSPA8P17-201ENST00000427029 1382 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 Y_RNA.516-201ENST00000384541 124 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 RPS3AP24-201ENST00000407896 734 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 HMGB3P31-201ENST00000413333 595 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 MTND4P20-201ENST00000424125 869 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC130360.1-201ENST00000425489 1117 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.86□□□□□ -1.47
VPS11Q9H270 ELOCP8-201ENST00000439309 332 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC092393.1-201ENST00000439625 742 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AL353093.1-201ENST00000441292 436 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 ELOCP15-201ENST00000442090 332 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 RPS7P3-201ENST00000443360 580 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC005297.1-201ENST00000444765 862 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 AL592447.1-201ENST00000447592 540 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC099670.1-201ENST00000455141 783 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 RPL7P48-201ENST00000461513 746 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 RPS7P10-201ENST00000464254 603 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 RPL7P40-201ENST00000481703 745 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS11Q9H270 RPL21P131-201ENST00000497298 483 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC092593.2-201ENST00000513866 913 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC113191.1-201ENST00000517759 403 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC130365.2-201ENST00000525882 1201 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS11Q9H270 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC125612.1-201ENST00000547580 377 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS11Q9H270 MRPS21P8-201ENST00000569196 235 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 EIF1P4-201ENST00000572664 335 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC010487.1-201ENST00000594408 1172 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC010857.1-201ENST00000606398 594 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AL450489.1-201ENST00000612071 468 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 FRG1HP-204ENST00000617940 757 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS11Q9H270 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS11Q9H270 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS11Q9H270 AC099654.6-201ENST00000636487 512 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC007603.3-201ENST00000636915 979 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 AC010325.3-201ENST00000641084 394 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS11Q9H270 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
VPS11Q9H270 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS11Q9H270 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.86□□□□□ -1.47
VPS11Q9H270 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VPS11Q9H270 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS11Q9H270 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VPS11Q9H270 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS11Q9H270 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS11Q9H270 AP004607.3-201ENST00000530354 3915 ntBASIC5.85□□□□□ -1.47
VPS11Q9H270 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS11Q9H270 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS11Q9H270 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS11Q9H270 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VPS11Q9H270 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS11Q9H270 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS11Q9H270 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS11Q9H270 GTF2H2B-203ENST00000508065 1432 ntBASIC5.85□□□□□ -1.47
VPS11Q9H270 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS11Q9H270 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VPS11Q9H270 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VPS11Q9H270 RN7SKP78-201ENST00000364711 318 ntBASIC5.85□□□□□ -1.47
VPS11Q9H270 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
VPS11Q9H270 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS11Q9H270 RNU1-136P-201ENST00000384181 164 ntBASIC5.85□□□□□ -1.47
VPS11Q9H270 PEX12P1-201ENST00000400284 1048 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms