Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC007679.3-201ENST00000434035 414 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC110602.1-201ENST00000437414 318 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 HMGB1P12-201ENST00000438594 598 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 ELOCP24-201ENST00000456370 334 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 MIR2053-201ENST00000459295 91 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 NDUFS5P2-201ENST00000484004 306 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC108688.1-201ENST00000485817 713 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC083904.1-201ENST00000487828 231 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RPS4XP14-201ENST00000493072 781 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RN7SL775P-201ENST00000498361 336 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC113367.2-201ENST00000505749 160 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 TMEM248P1-201ENST00000510579 951 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 SCARNA6-201ENST00000515982 265 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RN7SKP233-201ENST00000517005 110 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 MIR3167-201ENST00000579623 85 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 RN7SL715P-201ENST00000606972 286 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC119674.1-212ENST00000641155 993 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC025040.2-201ENST00000558657 1852 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 RNU6-99P-201ENST00000364721 107 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 RN7SKP69-201ENST00000365390 305 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 RNU6-244P-201ENST00000391028 104 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 MIR320C1-201ENST00000408566 88 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 GSTA10P-201ENST00000412182 576 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AL807761.1-201ENST00000417622 171 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 SLC35E1P1-201ENST00000419313 864 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 COX6CP17-201ENST00000421389 185 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AHCYP8-201ENST00000425108 209 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 HSPE1P16-201ENST00000426640 348 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 NRBF2P3-201ENST00000432731 865 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 ERLEC1P1-201ENST00000433806 578 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC009237.4-201ENST00000441078 238 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 CXCR2P1-202ENST00000443392 1074 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 GAPDHP23-201ENST00000444823 993 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 Y_RNA.653-201ENST00000459091 95 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 SNORA25.10-201ENST00000515926 124 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC099489.2-201ENST00000574976 260 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC011445.2-201ENST00000599274 173 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 AL096855.2-201ENST00000605785 369 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 RNU6-89P-201ENST00000606519 100 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 SNORA43.5-201ENST00000631270 138 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC027559.1-201ENST00000636288 271 ntBASIC7.84□□□□□ -1.15
LRCH3Q96II8 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms