Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TPT1P3-201ENST00000492841 512 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 TRAV31-201ENST00000502780 342 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC133963.2-201ENST00000513686 578 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 CIR1P1-201ENST00000524055 1133 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC091057.3-201ENST00000602684 733 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC023762.1-201ENST00000603280 584 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC025175.1-201ENST00000606482 759 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 RNU6-1192P-201ENST00000612197 107 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 RNU6-489P-201ENST00000618289 107 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC126544.2-201ENST00000625174 749 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AC009452.1-201ENST00000640823 606 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 AP001153.1-201ENST00000641024 338 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 HSPD1P14-201ENST00000432666 1618 ntBASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN4BQ8IWT1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 RNA5SP123-201ENST00000363244 119 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 RNU6-481P-201ENST00000384194 107 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 MIR550A3-201ENST00000390735 95 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 VN1R51P-201ENST00000411675 945 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 MTND2P40-201ENST00000436718 841 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC016772.1-201ENST00000444170 1261 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 MED28P3-201ENST00000444288 531 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 SBDSP1-204ENST00000453858 737 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC108120.2-201ENST00000512973 294 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 RPS27AP18-201ENST00000515536 459 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 SEPT10P1-201ENST00000517342 1162 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AP000676.2-201ENST00000529711 301 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AL121594.4-201ENST00000556211 1196 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC011492.1-201ENST00000600023 315 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC112503.1-201ENST00000608436 391 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AC090506.2-201ENST00000624521 419 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AL353662.3-201ENST00000625131 237 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 TTC39DP-201ENST00000416781 1688 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 Z95331.1-201ENST00000623075 23112 ntBASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SCN4BQ8IWT1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 AC073429.2-201ENST00000569694 1444 ntBASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 OR1L6-202ENST00000373684 1044 ntBASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 U3.23-201ENST00000391132 200 ntBASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 DDX39BP1-205ENST00000422507 192 ntBASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 AC114973.1-201ENST00000429057 632 ntBASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 VN1R54P-201ENST00000435210 1049 ntBASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SCN4BQ8IWT1 HMGB1P5-202ENST00000451497 985 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms