Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TMEM30CP-203ENST00000637814 1035 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 HSPD1P11-201ENST00000508643 1702 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AL450326.2-201ENST00000421913 1962 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 LINC01355-201ENST00000566551 5444 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AL359715.4-201ENST00000606629 1436 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 SNURFL-201ENST00000309296 343 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 SNORA73.1-201ENST00000363107 205 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 U8.4-201ENST00000363626 134 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 RNA5SP455-201ENST00000365190 119 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 SNORA66-201ENST00000384792 133 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 SNORA77-201ENST00000408716 125 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 RNU4-34P-201ENST00000410431 124 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC048351.1-201ENST00000420064 602 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 EIF4A1P1-201ENST00000420241 934 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 DDX39BP1-205ENST00000422507 192 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CKS1BP6-201ENST00000424932 240 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 RPS29P9-201ENST00000440360 171 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC073052.1-201ENST00000440417 714 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC023512.1-201ENST00000444513 499 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 RHEBP2-201ENST00000450289 600 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CYCSP34-201ENST00000458172 304 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 RPL21P6-201ENST00000479171 504 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC090114.3-201ENST00000479267 829 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 RPL5P22-201ENST00000480199 884 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 HMGN2P25-201ENST00000486956 268 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 HMGB1P3-201ENST00000502802 616 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 RFPL4AP5-201ENST00000514977 504 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 SS18L2P2-201ENST00000583960 235 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC006116.3-201ENST00000592968 361 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC005229.3-201ENST00000603438 323 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC090953.1-201ENST00000604305 1092 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC100814.1-201ENST00000606963 623 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AL139407.1-201ENST00000613826 1175 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 AC020658.4-201ENST00000613987 684 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.5□□□□□ -1.69
NIPAL3Q6P499 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NIPAL3Q6P499 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 RNU1-106P-201ENST00000384382 164 ntBASIC4.49□□□□□ -1.69
NIPAL3Q6P499 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 AL136116.2-201ENST00000404020 785 ntBASIC4.49□□□□□ -1.69
NIPAL3Q6P499 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.49□□□□□ -1.69
NIPAL3Q6P499 RPS20P25-201ENST00000412447 352 ntBASIC4.49□□□□□ -1.69
NIPAL3Q6P499 QRSL1P2-201ENST00000418582 964 ntBASIC4.49□□□□□ -1.69
NIPAL3Q6P499 RPS26P47-201ENST00000427219 348 ntBASIC4.49□□□□□ -1.69
NIPAL3Q6P499 MTCO3P21-201ENST00000430791 643 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms